Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02774 ATGGCGACGTACTTTAATGGAAGCACTTCGGAAATTCAACCTTCTGCAGATGGCGGCTTGCAAACGCTTTACCTTATGAACCCAACTTACGTACCCTACGCTGACGCGCCGCACCACCCAACAACGCTCCTCGTCAATCCCAACGCACCCAACCTCGCGAATATCCCACACGCGCCGCCAGTGTCACCAAACCAACAACATCACCACGTGATTCACGGCGTCACAAGCATCATCGGATCCGGCAATTCCGATGACCACTCCCGACCGTCGTTGATCGGCGAAAACATCGCCGCCTTCCACGGCTTCTCCGGCGGGGCAGGCACTGCCTCCACCGCCGCCCCTCGCCTTCACTATAACCTCTGGGGTCCGGTGGTTGATCAGCCGGGAACGCCGTCTAGCAGCTCCGGTGGAGGCGGTTTCCGGCGGCCGAGTCAGCAGGGTTTGTCTCTCAGTCTTTCATCACAGCAAACAAATTTTAGATCAGTTTCCGGCGAGCTTGACGTGGCCGGACAGGGCCACGTTGCCGGAATTGGGAACTCGCCGATGTCGGCGTCGATCGGAGTTTCAGGTGTTATTATGGGGTCAAAGTACTTGAAAGCTGCACAGGAGCTTCTGGATGAAGTTGTGAACGTGGGAAAAGGAATCTACAAAGAGGAGAAATTCTCAGAGAAGGTGAAAGCGAATAGGGAATCAACTAATTCTGGTGCTGCTGGTGATGGTGGAGATGGTTCAAGTGGTGGAGGAGAAAACAGTGCAGGGAAACAAGTGGTTGAACTCAGCACCGCTCAGAGGCAAGAGCTTCAGATGAAGAAGTCCAAGCTTGTGACCATGCTCGATGAGGTAGAACAAAGGTACAGACAATATCACCACCAAATGCAAATTGTGGTATCGTCATTTGAGCAGGCAGCAGGTTATGGGGCGGCAAAATCTTACACTGCCCTTGCCCTAAAGACTATCTCAAAGCAATTCAGGTGCCTTAAAGATGCAATCTCTGCACAAATCAAAGCCACGAGCAAGACATTGGGTGAAGATGATTGTTTAGGAGTTAAAGTAGAAGGGTCGAGGCTTAGGTTTGTTGACCACCATCTCAGGCAACAAAGGGCACTTCAGCAGCTAGGAATGATTCAACCCAATGCATGGAGGCCCCAAAGAGGCTTGCCTGAACGAGCTGTTTCCATTCTTCGGGCTTGGCTTTTTGAGCATTTCCTTCACCCTTATCCAAAGGACTCCGATAAAGTTATGCTTGCTAAACAAACTGGACTTGCTAGGAGCCAGGTGTCAAACTGGTTTATCAATGCCCGAGTTCGGCTTTGGAAGCCAATGGTTGAAGAAATGTACTTGGAAGAAATCAAGGAGCATGAACAAGGTAATGGCTCAGAAAACACCAAATCAAAAGAATCGAGCAAGGAGTTGGCTTCAACAGCAAATGTTGCACTCGATCATCTCCAATCAAAACAAGAAAGCTTCAACAACCAAAACACTTCCCCAACCGAGATCTCAACAAGCTCTTCAATGTCTCCAATGGGAGGGTCCCTTCAATCCCACTCTGGTTTCCATCTTGCAGGATCATCTGACATGCAAATTAGGAGTCCAAACAAACCAAGAAGTTCTGAAATGCAAAACTCTCCAAGTAGTATCCTTTCAGTGGACATGGAAATGAAGCATAGTGGTGACCATGGAAATAATAGAGATGCCAACACAAAGTTTGGTATTGAAAGGCATCACCAACAAAAAGATGGGTACCCTTTGATGACTAGCAATCCAAACCATGGTGGGGGGTTTGGAGCATTCACCATGGAAGACATTGGAAGCAGATTTAATGTCACTACTGAGCAACTAGCTTCAAGGTTCCATGGAAACGGTGTTTCTCTCACACTTGGACTTCCCCACAATGAGAACCTTTCTATGTCAGGAACTCAACAACATGGGTTCCTCTCACAGAATATACACCTGGGAAGGAGACTTGAAATGGGAACAAATGGAAATGAGTTTTGTACTATCAACACTGCTCCACCTTCTTCTCACTCAGGAACCACTTATGAGAGCATTGATATTCAAAACAGAAAGAGGTTTGTTGCTCATCAGTTATTACCAGATTTCGTGGCCTAG 2109 0.4808 MATYFNGSTSEIQPSADGGLQTLYLMNPTYVPYADAPHHPTTLLVNPNAPNLANIPHAPPVSPNQQHHHVIHGVTSIIGSGNSDDHSRPSLIGENIAAFHGFSGGAGTASTAAPRLHYNLWGPVVDQPGTPSSSSGGGGFRRPSQQGLSLSLSSQQTNFRSVSGELDVAGQGHVAGIGNSPMSASIGVSGVIMGSKYLKAAQELLDEVVNVGKGIYKEEKFSEKVKANRESTNSGAAGDGGDGSSGGGENSAGKQVVELSTAQRQELQMKKSKLVTMLDEVEQRYRQYHHQMQIVVSSFEQAAGYGAAKSYTALALKTISKQFRCLKDAISAQIKATSKTLGEDDCLGVKVEGSRLRFVDHHLRQQRALQQLGMIQPNAWRPQRGLPERAVSILRAWLFEHFLHPYPKDSDKVMLAKQTGLARSQVSNWFINARVRLWKPMVEEMYLEEIKEHEQGNGSENTKSKESSKELASTANVALDHLQSKQESFNNQNTSPTEISTSSSMSPMGGSLQSHSGFHLAGSSDMQIRSPNKPRSSEMQNSPSSILSVDMEMKHSGDHGNNRDANTKFGIERHHQQKDGYPLMTSNPNHGGGFGAFTMEDIGSRFNVTTEQLASRFHGNGVSLTLGLPHNENLSMSGTQQHGFLSQNIHLGRRLEMGTNGNEFCTINTAPPSSHSGTTYESIDIQNRKRFVAHQLLPDFVA 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02774 702 Gene3D - 383 445 - -
Gma13g02774 702 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 5 7 658 - -
Gma13g02774 702 MobiDBLite consensus disorder prediction 452 467 - -
Gma13g02774 702 MobiDBLite consensus disorder prediction 468 544 - -
Gma13g02774 702 SMART prehox3 186 332 IPR006563 -
Gma13g02774 702 ProSiteProfiles 'Homeobox' domain profile. 377 440 IPR001356 GO:0003677
Gma13g02774 702 SUPERFAMILY Homeodomain-like 381 446 IPR009057 -
Gma13g02774 702 Coils Coil 264 284 - -
Gma13g02774 702 MobiDBLite consensus disorder prediction 223 254 - -
Gma13g02774 702 Pfam Associated with HOX 191 331 IPR006563 -
Gma13g02774 702 MobiDBLite consensus disorder prediction 452 544 - -
Gma13g02774 702 MobiDBLite consensus disorder prediction 127 156 - -
Gma13g02774 702 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 7 658 - -
Gma13g02774 702 CDD homeodomain 380 441 IPR001356 GO:0003677
Gma13g02774 702 Pfam Homeobox KN domain 397 436 IPR008422 GO:0003677|GO:0006355
Gma13g02774 702 SMART HOX_1 380 444 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02774 Gma-Chr13 42293472 42298555 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02774 1 702 Homeobox Transcription Factor Family AT2G35940 46.462 5.59e-146 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Gma13g02774 POX 3.3e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02774 - - gmx:100779075 1296.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02774 13 42293472 42298555 Gma13g02774 13 42293472 42298555 ECH
Gma13g02774 13 42293472 42298555 Gma12g01784 12 38456213 38460047 GST
Gma13g02774 13 42293472 42298555 Gma12g00843 12 8010269 8014529 PCT
Gma13g02774 13 42293472 42298555 Gma11g01455 11 15160717 15164938 PCT
Gma12g00843 12 8010269 8014529 Gma13g02774 13 42293472 42298555 PCT
Gma11g01455 11 15160717 15164938 Gma13g02774 13 42293472 42298555 PCT