Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02761 ATGGGTGTCTCTGGGAAGTGGATTAAAGCATTGGTTGGTCTAAAGAAATCAGAAAAGCCAGAGAAGGATGGAAATGTTGGCAAGTTTCATCATCAGAGAAGGCATGATGTCGAATTTAATAATGGTAAACTTCCAAACGAATTGGATAATGATGCTACTACACCTGTTGAAGATGTTAATGGCCATGCAAACCTTGATGCCCACTATTCATCTTCTTCTTCACAAGCACATGATGCTGCACATAATCAACAAATGAGGGAGGAATGGGCTGCAATACACATTCAAACAGCATTTAGAGGATTTCTGGCCAGAAGAGCACTACGGGCTTTGAAAGGTGTGGTAAGGCTTCAGGCCCTTGTAAGAGGCCATGCAGTGAGAAAACAAGCCGCAATAACACTCCGTTGTATGCAAGCTTTAGTGAGGGTTCAAGCTCGTGTTCGAGCTAGGCGTGTTTGCATGGCATTGGAAACTCAAGCATCACAACAGAAGCATCAGCAAAACCTTGCAAATGAAGCTCGAGTTCGAGAAATAGAAGAAGGATGGTGTGATAGTGTAGGATCTGTTGAAGAAATTCAGGCTAAATTATTGAAGAGACAGGAGGCTGCAGCAAAACGTGAGAGAGCCATGGCATATGCTCTATCTCATCAGTGGCAGGCAGGATCAAGACAGCAGCCTGTTTCCTCTGGTGGATTTGAACCGGATAAAAACAGCTGGGGTTGGAATTGGTTGGAAAGGTGGATGGCTGTCCGTCCTTGGGAGAACCGCTTTGTTGACATAAATATGAAGGATGGAGTAACAGTACATGAAGATGGAACTAAGGATGATAAAAATGAAACCCCACCTCAGTTGAGCTCTGCTTACAAGAAACCATTCTCATCAAACACTCATCCAAACCTGACAAGTCAAGGAACTGGTCCCACTATTTCTGATGGCTGTGATTCTTCATCTAGTATGCCTGCAGGTTTGCCAGAATCATCAAACACACATCCTGTTAAGCCGACTTCTAAGGCAAATGCTGAAAATACTGTTGGAGAATTTAACTCAAAACCTAGAATTGGGTCAAGATCTCTTAGTAATCCAAAGGAGAGAACATCACAGGCAGATAAGCAGGCCAAAAAACGATTATCTCTGCCTAACAATACAGGGGCTGGTGCTGGATCTCAAATAGTCAAACACCCTGTTAGCATTACTAATGTGAAAGGGACGCTAAGCACGCAAAAGTCTACTAGGGATAAACCTAAGCTCAATGGAAGAAGGGAGGAGAATACAAAGTAG 1275 0.4337 MGVSGKWIKALVGLKKSEKPEKDGNVGKFHHQRRHDVEFNNGKLPNELDNDATTPVEDVNGHANLDAHYSSSSSQAHDAAHNQQMREEWAAIHIQTAFRGFLARRALRALKGVVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVCMALETQASQQKHQQNLANEARVREIEEGWCDSVGSVEEIQAKLLKRQEAAAKRERAMAYALSHQWQAGSRQQPVSSGGFEPDKNSWGWNWLERWMAVRPWENRFVDINMKDGVTVHEDGTKDDKNETPPQLSSAYKKPFSSNTHPNLTSQGTGPTISDGCDSSSSMPAGLPESSNTHPVKPTSKANAENTVGEFNSKPRIGSRSLSNPKERTSQADKQAKKRLSLPNNTGAGAGSQIVKHPVSITNVKGTLSTQKSTRDKPKLNGRREENTK 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02761 424 MobiDBLite consensus disorder prediction 371 410 - -
Gma13g02761 424 MobiDBLite consensus disorder prediction 266 424 - -
Gma13g02761 424 ProSiteProfiles IQ motif profile. 111 138 IPR000048 GO:0005515
Gma13g02761 424 PANTHER IQ-DOMAIN 5-RELATED 2 388 - -
Gma13g02761 424 Gene3D - 88 129 - -
Gma13g02761 424 MobiDBLite consensus disorder prediction 278 364 - -
Gma13g02761 424 PANTHER IQ-DOMAIN 5-RELATED 2 388 - -
Gma13g02761 424 MobiDBLite consensus disorder prediction 65 80 - -
Gma13g02761 424 Pfam IQ calmodulin-binding motif 111 128 IPR000048 GO:0005515
Gma13g02761 424 Pfam IQ calmodulin-binding motif 89 108 IPR000048 GO:0005515
Gma13g02761 424 MobiDBLite consensus disorder prediction 39 82 - -
Gma13g02761 424 ProSiteProfiles IQ motif profile. 87 115 IPR000048 GO:0005515
Gma13g02761 424 SMART iq_5 86 108 IPR000048 GO:0005515
Gma13g02761 424 SMART iq_5 109 130 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02761 Gma-Chr13 42188531 42194994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02761 1 419 IQD Protein Family AT3G22190 54.060 1.21e-118 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02761 - - gmx:100819346 800.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02761 13 42188531 42194994 Gma13g02761 13 42188531 42194994 ECH
Gma13g02761 13 42188531 42194994 Gma12g01796 12 38566728 38574232 GST