Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02757 ATGTCAATGGACATGATGGCAACCGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCACTCTAGCGGTTAGTGTTCCATGCAGCAGTTTGCTCACCATAGTTACGGTTAGATGTGGACATTGTGCCaatttgctgacagttaacatgggagcatcacttcaaacttttccttctcaagacactactcagTTACAGAGACAGCATCTCAGTGTTCAAGAAGCATGCAGCAAGGAACTAGGATCATCATCAAAGTGCAAAACATTTGAGACCGTAGACCATGATCAGCAACCTAGGATTCCTCCTATTCGTCCTCCTGAGAAGAGACAACGTGTTCCTTCTGCTTATAACCGGTTCATTAAGGAGGAAATACAAAGAATTAAGGCTAGTAATCCAGATATCAGCCACAGGGAAGCATTTAGCACAGCAGCCAAAAACTGGGCACATTTCCCTCACATTCACTTTGGGTTAAAGCTGGATGGCAATAAGCAAGCAAAGTTGGACCAGGGGGATGGTACTCAAAAGTCTAACGGATTTTACTGA 546 0.3919 MSMDMMATERVCYVHCNFCNTTLAVSVPCSSLLTIVTVRCGHCANLLTVNMGASLQTFPSQDTTQLQRQHLSVQEACSKELGSSSKCKTFETVDHDQQPRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDGNKQAKLDQGDGTQKSNGFY 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02757 181 PANTHER PROTEIN YABBY 6-RELATED 3 181 IPR006780 GO:0007275
Gma13g02757 181 PANTHER AXIAL REGULATOR YABBY 2-RELATED 3 181 - -
Gma13g02757 181 Gene3D High mobility group box domain 96 154 IPR036910 -
Gma13g02757 181 MobiDBLite consensus disorder prediction 92 113 - -
Gma13g02757 181 SUPERFAMILY HMG-box 103 151 IPR036910 -
Gma13g02757 181 Pfam YABBY protein 7 158 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02757 Gma-Chr13 42147499 42157253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02757 1 181 C2C2-YABBY Transcription Factor Family AT1G08465 65.054 1.22e-80 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Gma13g02757 YABBY 1.8e-71 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02757 K25796 - gmx:100815973 365.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02757 13 42147499 42157253 Gma12g01801 12 38617403 38627170 GST
Gma13g02757 13 42147499 42157253 Gma12g00854 12 8217381 8226034 PCT
Gma13g02757 13 42147499 42157253 Gma06g02742 06 51209221 51216754 PCT
Gma12g00854 12 8217381 8226034 Gma13g02757 13 42147499 42157253 PCT
Gma06g02742 06 51209221 51216754 Gma13g02757 13 42147499 42157253 PCT