Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02753 ATGGAGGGTGCTGGGATGGAAGAGAATAATATTATTAATGATGATAATAAGTCTGAGGCGCATTTGACTTCTGCCGCTGCTTTTGTGGAGGGTGGAATTCAGGATGCTTGTGATGATGCTTGCAGCATATGCCTTGAAGCTTTCTGTGATAGTGATCCCTCCACGGTGACAAGTTGCAAGCATGAGTTTCATCTTCAGTGCATTCTGGAATGGTGTCAAAGAAGCTCCCAGTGCCCCATGTGTTGGCAACCTATCAGTCTCAAAGATCCAACAAGCCAAGAATTACTTGAGGCAGTGGAAAGAGAGCGGAACTTTAGGTTCAATCCATCTAGAAATGCCACCATATTTCATCATCCAACACTGGGGGATTTTGAGTTACAACATTTGCCAGTTGGAGCTAGTGATGCTGATCTTGAAGAGCGTATTATCCAACACTTAGCTGCTGCAGCAGCGATGGGAAGAGCACGGCACGTTGCTAGAAGAGAAGGCCAGAGAAACAGATCATCAGCTCAAGGTCGCCAACATTTTTTGGTTTTTTCAACTCATCCTAATTCACCACCCATGGCTCCTGCTTCTTCCTCTCCATCTCAGAGGGGGGATGATGAACCAACTCCTACAATTGATGTTGCCAATCTGTCTCCAACTCCTGCAACTGGAGAAGAATCATCGCAGCCGACTTTAGTTTCGCCTGTTCAAGCAGAACAGGTGTCTGCTTCAGGATCTGGAACTACTGCTCTTGCTACAGATCATCAGGGATCATCCTACAACAATAGGAGATCTCCTAATCAGTCATCTCCAAGTAGTCAAGACAGAGCAGGACCATCAGAATTACAGTCATTTTCAGAATCTCTGAAATCTAAACTGAATGCTGTGTCAACAAGATACAAGGAATCAATTTCCAAGAGCACAAGAGGGTGGAAGGAGAGATGGTTCTCCCGTAACAACACTATGTCTGACCTTGGATCTGAAGTTAGGCGAGAAGTTAATGCAGGGATTGCAACTGTGTCACGCATGATGGAACGCCTGGAGACCAGAGACAATAATAGAAGCAATAGCAATTCTGCTCCAAGTAATATAGAGGATGGTTCAGTGCAGGGATCTAATGATCAGACTTTAACAGCAGGCAATGAAGGGGGCTCTCTTATTTGTTTTGTCCAAAAGGAAGAAATAGAATTGCCCATTGGGGATGTGAAATTCCATGGATGGCATTGCCTATTGGCTGGCGCAGACCAGGCAAGTGATAATCCATTGGCCTGCAGAAGACCAACAATTGTGATATTGGAAATAAAAAACTTAAAAAAGGAAGCAGTGGTCTCTTTCGTTTGA 1326 0.4457 MEGAGMEENNIINDDNKSEAHLTSAAAFVEGGIQDACDDACSICLEAFCDSDPSTVTSCKHEFHLQCILEWCQRSSQCPMCWQPISLKDPTSQELLEAVERERNFRFNPSRNATIFHHPTLGDFELQHLPVGASDADLEERIIQHLAAAAAMGRARHVARREGQRNRSSAQGRQHFLVFSTHPNSPPMAPASSSPSQRGDDEPTPTIDVANLSPTPATGEESSQPTLVSPVQAEQVSASGSGTTALATDHQGSSYNNRRSPNQSSPSSQDRAGPSELQSFSESLKSKLNAVSTRYKESISKSTRGWKERWFSRNNTMSDLGSEVRREVNAGIATVSRMMERLETRDNNRSNSNSAPSNIEDGSVQGSNDQTLTAGNEGGSLICFVQKEEIELPIGDVKFHGWHCLLAGADQASDNPLACRRPTIVILEIKNLKKEAVVSFV 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02753 441 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 14 116 IPR013083 -
Gma13g02753 441 SMART ring_2 41 81 IPR001841 -
Gma13g02753 441 MobiDBLite consensus disorder prediction 342 371 - -
Gma13g02753 441 MobiDBLite consensus disorder prediction 348 371 - -
Gma13g02753 441 Pfam Ring finger domain 40 81 IPR001841 -
Gma13g02753 441 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RHF2A 6 374 - -
Gma13g02753 441 MobiDBLite consensus disorder prediction 179 201 - -
Gma13g02753 441 SUPERFAMILY RING/U-box 34 89 - -
Gma13g02753 441 MobiDBLite consensus disorder prediction 179 299 - -
Gma13g02753 441 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 6 374 - -
Gma13g02753 441 MobiDBLite consensus disorder prediction 208 299 - -
Gma13g02753 441 ProSiteProfiles Zinc finger RING-type profile. 41 81 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02753 Gma-Chr13 42114664 42118298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02753 38 81 C3H Transcription Factor Family AT5G15790 50.000 1.02e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02753 K19043 - gmx:100814908 726.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02753 13 42114664 42118298 Gma12g01804 12 38654262 38658204 GST