Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02718 ATGGGAAGCAACTTGAGGTTTTTGAGTCTTTGCCTCTTGGCATTGATTGCATCAACTCATGCTCAACTTCAGCTTGGTTTTTATGCTAACAGTTGCCCAAAAGCAGAGCAAATTGTTTTGAAATTTGTTCATGACCATATCCACAATGCTCCATCACTAGCAGCTGCATTAATAAGAATGCACTTTCATGACTGTTTTGTAAGGGGATGTGATGCATCAGTCCTTCTGAACTCAACAACCAATCAGGCTGAGAAGAATGCTCCTCCAAATCTCACAGTAAGAGGCTTTGACTTCATTGACAGAATAAAGAGCCTTGTTGAAGCTGAATGCCCTGGTGTGGTCTCTTGTGCTGATATCCTCACTTTGGCTGCCAGAGACACTATTGTAGCCACAGGTGGACCTTTTTGGAAAGTTCCAACTGGTCGAAGGGATGGGGTCGTCTCTAACTTGACGGAAGCCAGAAATAACATTCCTGCTCCATCTTCCAACTTTACCACCCTACAAACACTCTTTGCTAACCAAGGACTTGATTTGAAGGACTTGGTCCTGCTCTCTGGTGCTCACACAATTGGTATCGCTCATTGCTCATCATTATCAAACCGGTTGTTCAATTTCACTGGCAAGGGTGATCAAGACCCGTCACTAGATAGTGAATATGCTGCAAATTTGAAAGCATTCAAGTGCACAGACCTCAACAAGTTGAACACCACAAAAATTGAGATGGACCCTGGAAGTCGCAAGACATTTGATCTTAGCTACTATAGTCACGTTATTAAGAGAAGGGGTCTATTTGAGTCAGATGCTGCATTATTGACTAACTCAGTTACAAAGGCACAAATCATCCAATTGCTTGAAGGGTCAGTTGAAAATTTCTTTGCTGAGTTTGCAACCTCCATCGAGAAAATGGGAAGAATTAATGTGAAGACAGGGACAGAAGGAGAGATCAGGAAGCATTGTGCATTTATAAATAGCTAA 975 0.4226 MGSNLRFLSLCLLALIASTHAQLQLGFYANSCPKAEQIVLKFVHDHIHNAPSLAAALIRMHFHDCFVRGCDASVLLNSTTNQAEKNAPPNLTVRGFDFIDRIKSLVEAECPGVVSCADILTLAARDTIVATGGPFWKVPTGRRDGVVSNLTEARNNIPAPSSNFTTLQTLFANQGLDLKDLVLLSGAHTIGIAHCSSLSNRLFNFTGKGDQDPSLDSEYAANLKAFKCTDLNKLNTTKIEMDPGSRKTFDLSYYSHVIKRRGLFESDAALLTNSVTKAQIIQLLEGSVENFFAEFATSIEKMGRINVKTGTEGEIRKHCAFINS 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02718 324 PANTHER PEROXIDASE 25-RELATED 10 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma13g02718 324 CDD secretory_peroxidase 22 322 IPR033905 GO:0004601|GO:0042744
Gma13g02718 324 ProSiteProfiles Plant heme peroxidase family profile. 22 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma13g02718 324 Gene3D Peroxidase, domain 2 158 302 - -
Gma13g02718 324 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma13g02718 324 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma13g02718 324 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma13g02718 324 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma13g02718 324 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma13g02718 324 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma13g02718 324 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma13g02718 324 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma13g02718 324 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma13g02718 324 SUPERFAMILY Heme-dependent peroxidases 22 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gma13g02718 324 Pfam Peroxidase 41 279 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma13g02718 324 ProSitePatterns Peroxidases active site signature. 54 65 IPR019794 GO:0004601
Gma13g02718 324 Gene3D - 27 323 - -
Gma13g02718 324 PANTHER PEROXIDASE 10 323 - -
Gma13g02718 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
Gma13g02718 324 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma13g02718 324 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma13g02718 324 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma13g02718 324 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma13g02718 324 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02718 Gma-Chr13 41793882 41795396 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02718 8 324 Peroxidase AT1G05260 68.770 4.48e-167 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02718 K00430 - gmx:547872 647.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02718 13 41793882 41795396 Gma13g02718 13 41793882 41795396 ECH
Gma13g02718 13 41793882 41795396 Gma12g01844 12 39115418 39117696 GST
Gma13g02718 13 41793882 41795396 Gma12g00902 12 9065042 9067576 PCT
Gma13g02718 13 41793882 41795396 Gma06g02701 06 50675851 50678406 PCT
Gma12g00902 12 9065042 9067576 Gma13g02718 13 41793882 41795396 PCT
Gma06g02701 06 50675851 50678406 Gma13g02718 13 41793882 41795396 PCT