Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02707 ATGTCTTCCTCAAAGCTCAGCTCTCCCGTAACCTTCTTGCTAATCTTTGCTCTTGTTTTCCAAACATGTTTTGGAGCTAACCCTCTCTACCATTTCTGTTCAAGTTCTCAGAACTTCAAAGCCAACAGTCCCTATGAATCAAACTTGAAAACACTCATCAACTCGCTTATATACAGAACACCTTCAACAGGTTTTGGTGTTGGCTCAGTTGGTCAATACCAAAACGAAAAAGCATATGGTCTTGCTCTTTGTCGTGGCGATGTGTCATCATCAGAATGCAAAACTTGTGTCTCTGATGCAACCAAAGAAATCCTCAGTCGCTGTCCATACAACAAAGGCGGCATCATATGGTACGACAACTGCATGTTGAAGTACTTAGACACTGATTTCTTCGGCAAGATTGACAACACAAACAAGTTCTCTTTGTTGAACGTGCGAAATGTGAGTGATCCTGCCATGTTTAACTACATGACTAAGGAGTTGTTGAGCTTACTTGCCTATACGGCTTCTTTGAGCCCTAAAATGTATGCAAGTGGAGAGCTAAAGATTGGTGGAGAATCAAAGGATATTTATGGGTTGACTCAGTGCACCAGAGACCTTTCTAGCAGTGATTGTAACAAGTGTCTTGATGATGCAATTAGCCAACTCCCTAATTGTTGTGATGGAAAAGAGGGAGGAAGAGTTGTGGCTGGAAGTTGCAACATCCGATATGAGATTTATCCATTTGTCAAAGCATAG 738 0.416 MSSSKLSSPVTFLLIFALVFQTCFGANPLYHFCSSSQNFKANSPYESNLKTLINSLIYRTPSTGFGVGSVGQYQNEKAYGLALCRGDVSSSECKTCVSDATKEILSRCPYNKGGIIWYDNCMLKYLDTDFFGKIDNTNKFSLLNVRNVSDPAMFNYMTKELLSLLAYTASLSPKMYASGELKIGGESKDIYGLTQCTRDLSSSDCNKCLDDAISQLPNCCDGKEGGRVVAGSCNIRYEIYPFVKA 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02707 245 ProSiteProfiles Gnk2-homologous domain profile. 27 130 IPR002902 -
Gma13g02707 245 Gene3D - 136 242 IPR038408 -
Gma13g02707 245 Gene3D - 26 130 IPR038408 -
Gma13g02707 245 PANTHER DOMAIN-CONTAINING PROTEIN 2, PUTATIVE-RELATED 1 245 - -
Gma13g02707 245 Pfam Salt stress response/antifungal 33 125 IPR002902 -
Gma13g02707 245 Pfam Salt stress response/antifungal 149 239 IPR002902 -
Gma13g02707 245 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38-RELATED 1 245 - -
Gma13g02707 245 ProSiteProfiles Gnk2-homologous domain profile. 136 242 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02707 Gma-Chr13 41724061 41725008 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02707 29 244 Pollen Coat Proteome AT4G20670 42.222 2.42e-52 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02707 - - gmx:100527155 387.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02707 13 41724061 41725008 Gma13g02707 13 41724061 41725008 ECH
Gma13g02707 13 41724061 41725008 Gma12g01851 12 39165498 39166409 GST