Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02687 ATGAGAACTGGTGAGCTTCTGTTGTTCTTTTCCTTTCTTGTTTCTTTGGCGCTATGGTTCCAACTCTGTTTCGCTGGAGATACTTTGATCGCTGGCCAGGAGATAACTCAGAACAGGACTGGGAACCTTGTTTCATCTAGCCGCACATTTGAGCTGGGCTTCTTTTCTTTAAGTGGAGAAAAAAAATACTACTTGGGGATATGGTATCGCGAGTTGGAGATGGAAACACAAAAAGCGGTATGGGTTGCCAATAGAGACAAGCCTGTTGAAGATTCCAGTAGAGTTTTTCGAATTGCAGAGGATGGAAATATGGTGGTAGAAGGTGCTTCATCAAAAAGATATTGGTCCTCTAAACTTGAAGCCTCCTCGTCCACAAACAGAACAGTGAAGCTCCTAGATTCAGGGAACCTAGTACTAATGGACGATAACTTGGGAATTACGAGTTACCTGTGGCAGAGCTTCCAAAACCCAACAGACACGTTTCTACCTGGCATGAAAATGGATGCAAATTTATCGTTGATTTCTTGGAAAGACGCCACTGACCCCTCGCCTGGGAACTTCTCCTTTAAGCTGATTCATGGTCAAAAGTTCGTAGTGGAAAAGCACTTAAAGCGTTACTGGACACTTGATGCAATTGATTATAGAATTGCTAGGTTGTTGGAAAACGCCACTTCGGGTAAAGTACCGTACAAATTATCAGGAATAACTTTATATCCAGCGAGAGCTTACAGATACGGGAAATCAATGCTATTAATGAATTATAGCGGGGAGATACAATTTCTCAAGTGGGATGAGGATGACTGGCAATGGGATAAACGCTGGTCAAGGCCTGCTGACAAGTGCGACATATATAACTGTTGCGGGAGCTTCGGCTTCTGTAACAAAAATAATTTGAATCTGAATCTGGAGCCTTGCAGATGTTTACCAGGATTCCGTCGCCGGCCTGCCGGAGAAATCCAAGACAAAGGATGTGTTAGAAAATCAACATCATCGTGTATCGACAAGAAGGACGTGATGTTCCTGAACTTAACCAACATAAAAGTTGGTGATCTCCCAGACCAAGAATCCTTTGACGGAACAGAAGCAGAATGTCAATCATTATGCCTTAACAATAATACCAAGTGTTCTGAGTCTCAGTGCCAGGCATATTCATATAGTAATAGTACGTCATATGATCGTGATCACTCCTCGACATGCAAGATCTGGAGACGAGATTTATCTACTCTTCTAGAGAGGTACAATAGTGATTTTCTAGAGGAGTTCGTTCCTGGTTGTATTCTGTCTATCCTGGTTAAGAGATCAGATATAGTACCATATGCAAAATCTTGTGAACCATGCGGCATATACGTGATTCCTTATCCGCTAAGCACTGGGCCAAACTGTGGAGACCCCATGTACAACAACTTCAATTGTAATAAATCGACAGGCCAAGTTACCTTCAAGATACTGGGAGGAACATCACACCAAGTTATTTGGATCGATGAAGATACCAGAATGTTTTACATTCAGCCAAATGGTTCATATCCCTGTAATTCCAGCAATCAAAATATCACGCCTAATTTTCCATTTAATGTAACTGATCAGTGTTCTGAAGCTGATGATGATGGAAAGATTAAAATTACTTGGCTACCAGCACCAGAACCGCCCTGTACTGAGCTAATAGATTGCCACAATTGGCCCCATTCGACATGCAGAGAAACAAGTGAAGGAGGAAGCAGGTGCCGTTGTGACTCAAACTATAAGTGGAATAACACAATCATGAGTTGCACCTTAGAAGAGCATTCAACCAACCAGCTGGAATTGATTCTTATAGTAATTCTTAGTGGCATGGCTATTCTGGCATGCACAATAGCATTTGCCATAGTGCGGAGAAAGAAAAAAGCTCATGAGCTTGGTCAGGCAAATGCTCGGATTCAGGAGAGCTTATATGAGAGTGAAAGACATGTGAAAGGTTTGATTGGCTTAGGAAGTTTAGCAGAAAAAGACATTGAAGGCATTGAAGTACCCTGTTATACCTTTGCAAGcattctagcagctacagctaatttttcagattctaacaaacttggaagaggaggttatgggcctgtgtataagggaacgtttcctggaggtcaagatatagcagtaaaaaggctttcaagtgtttccactcaaggcttacaggaattcaagaatgaggttattttgatagcaaaacttcaacatcggaaccttgttagactcaggggctattgcataaaaggagatgaaaaaatcttactttatgaatacatgccaaacaagagcttggactcatttatatttgaccggacacgaactttactcctggattggccaatgcggtttgagataattctaggcattgcacgtggccttctctatcttcaccaagactcgagattgagagtgattcatagagacctcaaaaccagcaacattcttctagatgaggatatgaatccaaagatatcagactttggccttgccaaaatatttgggggaaaagaaactgaagcaagtacagagagaatagttggaacctatggatatatggctccagatccaaacaaatttctagccttttgggtcatgcatggaagttatggacagagaagaagctactggatttaa 2634 0.3231 MRTGELLLFFSFLVSLALWFQLCFAGDTLIAGQEITQNRTGNLVSSSRTFELGFFSLSGEKKYYLGIWYRELEMETQKAVWVANRDKPVEDSSRVFRIAEDGNMVVEGASSKRYWSSKLEASSSTNRTVKLLDSGNLVLMDDNLGITSYLWQSFQNPTDTFLPGMKMDANLSLISWKDATDPSPGNFSFKLIHGQKFVVEKHLKRYWTLDAIDYRIARLLENATSGKVPYKLSGITLYPARAYRYGKSMLLMNYSGEIQFLKWDEDDWQWDKRWSRPADKCDIYNCCGSFGFCNKNNLNLNLEPCRCLPGFRRRPAGEIQDKGCVRKSTSSCIDKKDVMFLNLTNIKVGDLPDQESFDGTEAECQSLCLNNNTKCSESQCQAYSYSNSTSYDRDHSSTCKIWRRDLSTLLERYNSDFLEEFVPGCILSILVKRSDIVPYAKSCEPCGIYVIPYPLSTGPNCGDPMYNNFNCNKSTGQVTFKILGGTSHQVIWIDEDTRMFYIQPNGSYPCNSSNQNITPNFPFNVTDQCSEADDDGKIKITWLPAPEPPCTELIDCHNWPHSTCRETSEGGSRCRCDSNYKWNNTIMSCTLEEHSTNQLELILIVILSGMAILACTIAFAIVRRKKKAHELGQANARIQESLYESERHVKGLIGLGSLAEKDIEGIEVPCYTFASILAATANFSDSNKLGRGGYGPVYKGTFPGGQDIAVKRLSSVSTQGLQEFKNEVILIAKLQHRNLVRLRGYCIKGDEKILLYEYMPNKSLDSFIFDRTRTLLLDWPMRFEIILGIARGLLYLHQDSRLRVIHRDLKTSNILLDEDMNPKISDFGLAKIFGGKETEASTERIVGTYGYMAPDPNKFLAFWVMHGSYGQRRSYWI 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02687 877 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 17 855 - -
Gma13g02687 877 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 17 855 - -
Gma13g02687 877 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 182 IPR036426 -
Gma13g02687 877 SMART serkin_6 683 877 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02687 877 Gene3D - 22 155 IPR036426 -
Gma13g02687 877 Gene3D Transferase(Phosphotransferase) domain 1 759 873 - -
Gma13g02687 877 ProSiteProfiles PAN/Apple domain profile. 332 425 IPR003609 -
Gma13g02687 877 SMART blect_4 32 157 IPR001480 -
Gma13g02687 877 Pfam Protein kinase domain 684 855 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02687 877 ProSiteProfiles Protein kinase domain profile. 683 877 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02687 877 PIRSF SRK 2 445 IPR024171 GO:0004674
Gma13g02687 877 PIRSF SRK 554 867 IPR024171 GO:0004674
Gma13g02687 877 PIRSF SRK 469 598 IPR024171 GO:0004674
Gma13g02687 877 ProSitePatterns Serine/Threonine protein kinases active-site signature. 804 816 IPR008271 GO:0004672|GO:0006468
Gma13g02687 877 Pfam S-locus glycoprotein domain 247 313 IPR000858 GO:0048544
Gma13g02687 877 CDD B_lectin 35 157 IPR001480 -
Gma13g02687 877 SUPERFAMILY Protein kinase-like (PK-like) 666 855 IPR011009 -
Gma13g02687 877 Gene3D Phosphorylase Kinase; domain 1 657 758 - -
Gma13g02687 877 Pfam D-mannose binding lectin 80 171 IPR001480 -
Gma13g02687 877 SMART ntp_6 335 421 IPR003609 -
Gma13g02687 877 ProSiteProfiles Bulb-type lectin domain profile. 26 152 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02687 Gma-Chr13 41578465 41583366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02687 658 876 Receptor kinase-like Gene Family AT4G05200 57.991 3.17e-79 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma13g02687 Pkinase 2.9e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02687 - - gmx:100817898 1743.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02687 13 41578465 41583366 Gma13g02687 13 41578465 41583366 ECH
Gma13g02687 13 41578465 41583366 Gma12g01870 12 39350933 39355041 GST
Gma13g02687 13 41578465 41583366 Gma12g00926 12 9429249 9434258 PCT