Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02686 ATGAAGAACTGCGAGTTGTGCAAGCTTCCGGCTCGGACTTTCTGCGAGTCGGACCAGGCTAGCTTATGCTGGGACTGCGACGCCAAGGTTCATGGAGCCAACTTCCTCGTGGAAAGACACACGCGCACGCTCCTCTGCCACGCGTGCCAGTCGCCCACGCCGTGGAAGGCCTCCGGCGCCGCCCTCGGAAACACCGTCTCGCTGTGCGAGAGATGCGCCGGCGGAACCACCGAACAAGGTCAAGAGAGCCAAGGAGGCAATGACGAcgacatagacaccgacatagacaccgacGATGAGGATGACTACGATGAGAGCGAGGACGAGGTTGCCGCCGACGAGGAGGACGGAGACAACCAGGTTGTCCCTTGGTCCTCCGAGCCGCCGCCACCAGCCCCGAGCTCTTCCAGCAGCGAAGAGTCGGTTAGCCGGTGCAACAACGTGGACGAGGTTTCGACCACATTGAAACGCCGTCGCCAGGAGGACAATGATTTTCAGGGTTGGAATTCGAATAATTGGGGATGTGAACGGAGCGAAGTGGAGAGAGGAGGTTGGTTGGTTCGGTTGCGGCGGAGAACCGCCGATGATGTGGCGGTTGAGCAACGGAGTGCTAGAGCGGCGTCTCCAGACGGTTGCTGTGGTGATAGAGCATCTGAAGACGTTTGA 666 0.5736 MKNCELCKLPARTFCESDQASLCWDCDAKVHGANFLVERHTRTLLCHACQSPTPWKASGAALGNTVSLCERCAGGTTEQGQESQGGNDDDIDTDIDTDDEDDYDESEDEVAADEEDGDNQVVPWSSEPPPPAPSSSSSEESVSRCNNVDEVSTTLKRRRQEDNDFQGWNSNNWGCERSEVERGGWLVRLRRRTADDVAVEQRSARAASPDGCCGDRASEDV 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02686 221 MobiDBLite consensus disorder prediction 76 172 - -
Gma13g02686 221 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 221 - -
Gma13g02686 221 PANTHER - 1 221 - -
Gma13g02686 221 MobiDBLite consensus disorder prediction 202 221 - -
Gma13g02686 221 CDD Bbox1_BBX-like 4 45 - -
Gma13g02686 221 MobiDBLite consensus disorder prediction 136 150 - -
Gma13g02686 221 MobiDBLite consensus disorder prediction 85 116 - -
Gma13g02686 221 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
Gma13g02686 221 SMART bboxneu5 1 45 IPR000315 GO:0008270
Gma13g02686 221 Pfam B-box zinc finger 2 43 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02686 Gma-Chr13 41569942 41571540 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02686 2 131 C2C2-CO-like Transcription Factor Family AT5G54470 51.128 1.29e-34 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma13g02686 zf-B_box 1.4e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02686 - - gmx:100801024 375.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02686 13 41569942 41571540 Gma13g02686 13 41569942 41571540 ECH
Gma13g02686 13 41569942 41571540 Gma12g01872 12 39373757 39375163 GST
Gma13g02686 13 41569942 41571540 Gma12g00927 12 9453183 9453785 PCT
Gma13g02686 13 41569942 41571540 Gma06g02681 06 50455554 50456718 PCT
Gma12g00927 12 9453183 9453785 Gma13g02686 13 41569942 41571540 PCT
Gma06g02681 06 50455554 50456718 Gma13g02686 13 41569942 41571540 PCT