Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02680 ATGGATTTTGACCTTGAAAACCCTCTTGGAAACTTCCACGACCTTCCCTGCGACGCTGTCCCTTCCCTCTTCCTCATCGAATCCGACCACATCCCTCCTCCGAACTACTGTCAGAGTCTCAAAGCCAGCGACTTCGACATCTCTGTTAGAAGAGATGTTGTCTCTTTGATCTCGCAGTTGTCCTGCACCTTCGATCCGGTTCTCCCTTACTTAGCTATCAACTACTTGGATCGCTTCCTCGCTAACCAAGGAATATTGCAACCAAAGCCATGGGCAAACAAGCTTCTTGCAGTCTCTTGCTTTTCTCTAGCTGCCAAGATGTTGAAAACAGAGTACTCTGCCACTGATGTCCAGGTTCTTATGAATCATGGCGATGGAGGTGCCATTTTTGAGACACAAACAATTCAAAGAATGGAGGGCATTGTCTTGGGAGCTCTACAATGGCGAATGCGTTCGATCACCCCCTTCTCTTTCATTCCCTTCTTCGTGAATTTGTTCAGGCTGAAAGACCCAGCATTGAGGCAGGTTCTGAAGGATCGAGCATCAGAAATAATACTCAAGTCACAAAGAGAGATAAAGGTCTTGGAATTCAAGCCATCTACAGTTGCTGCGTCAGCCCTTCTGTATGCTTCACATGAGTTGTTTCCCTTTCAATATCCGTGCTTCTTAAGAGCAATATCCGATTGTTCATATATTAATAAGGAAACTGTAGTGCAATGTTATAATGTGATACAAGATATAGCCAGGGAGGAGTACGAATCGGTGTTGAATATAAACTCAACTTCAGACACACCGGTTAATGTGTTAGACGAACATTTTCTGAGCTTGGAAAGTGAAAAAACCAACGGAACCAACGTTGTTGTGACACAAGAGCAGGACTTCAAAAGAAGGAAAACCACCGATTATGGCAACAATCGCAGGGTCCCGTTTTCACATTTTCATCAATGCTGA 951 0.4437 MDFDLENPLGNFHDLPCDAVPSLFLIESDHIPPPNYCQSLKASDFDISVRRDVVSLISQLSCTFDPVLPYLAINYLDRFLANQGILQPKPWANKLLAVSCFSLAAKMLKTEYSATDVQVLMNHGDGGAIFETQTIQRMEGIVLGALQWRMRSITPFSFIPFFVNLFRLKDPALRQVLKDRASEIILKSQREIKVLEFKPSTVAASALLYASHELFPFQYPCFLRAISDCSYINKETVVQCYNVIQDIAREEYESVLNINSTSDTPVNVLDEHFLSLESEKTNGTNVVVTQEQDFKRRKTTDYGNNRRVPFSHFHQC 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02680 316 Gene3D - 33 151 - -
Gma13g02680 316 SMART cyclin_7 157 246 IPR013763 -
Gma13g02680 316 SMART cyclin_7 51 144 IPR013763 -
Gma13g02680 316 SMART Cyclin_C_2 153 268 IPR004367 -
Gma13g02680 316 SUPERFAMILY Cyclin-like 135 249 IPR036915 -
Gma13g02680 316 CDD CYCLIN 50 143 IPR013763 -
Gma13g02680 316 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 5 303 - -
Gma13g02680 316 SUPERFAMILY Cyclin-like 13 150 IPR036915 -
Gma13g02680 316 PANTHER CYCLINS 5 303 IPR039361 -
Gma13g02680 316 CDD CYCLIN 153 244 IPR013763 -
Gma13g02680 316 Pfam Cyclin, C-terminal domain 153 251 IPR004367 -
Gma13g02680 316 Pfam Cyclin, N-terminal domain 28 150 IPR006671 -
Gma13g02680 316 Gene3D - 23 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02680 Gma-Chr13 41482834 41484854 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02680 1 300 Core Cell Cycle Gene Families AT4G03270 45.541 2.63e-81 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02680 K18812 - gmx:100799951 639.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02680 13 41482834 41484854 Gma13g02680 13 41482834 41484854 ECH
Gma13g02680 13 41482834 41484854 Gma12g01879 12 39464176 39465964 GST
Gma13g02680 13 41482834 41484854 Gma12g00943 12 9792774 9794738 PCT
Gma13g02680 13 41482834 41484854 Gma06g02674 06 50319920 50321920 PCT
Gma12g00943 12 9792774 9794738 Gma13g02680 13 41482834 41484854 PCT
Gma06g02674 06 50319920 50321920 Gma13g02680 13 41482834 41484854 PCT