Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02676 ATGGCTCAAGAGATGAATGAGCCTGCAATGAACATCATAGAGCAGTCTCAAGTTGCTCCTCCACAGGGCTCCCTTCCTTCAACAATTATCCCCCTCACTTTCCTCGACATTCCATGGCTCCTCAGCCGCCACGCCAGACGCATCTTCTTCTACGACTTTCCCTTTCCTACCACCCACTTCTTGCAAACAGCACTTCCTATTCTGAAACATTCTCTTTCCCACACACTCCAACACTTCTTCCCCTTTGCCTCCAATCTCATCCTCCCTCCACACCCCCACGTCCCTTACATCCGTTACCTTGAGGGTGACTCTCTCTCATTCACTGTCGCAGAGTCCAGTCCTGCAGACTTCACTCTTCTCACATCAGATTCCCCTCGAGACTCCTATGACTGGCAACCCCTTGCTCCGGTGCTACCCTCGCAACGTACTTCTCACGACGGCACGTGCGAGTTCCCCCTCATGGCCATTCAGGTAACGATGATACCAAACTCTGGATTCAGCATCTGTGTTATCTTCGACCACGTTGCAGGAGATGGGAGAACCCTTCATCATTTCATGAAGTTTTGGGCCTCCGTTTGCAAGGCCAAAGGAGATTTGGATTTCCCTTGCTCTATGCCTCTACCCTTATATGATAGGAACATAGTCAAAGACCCCAAAGGGCTCATGCACGTTTACATGCAAGACCTGAGAAATTCAGCGTTGCTAACTAAACAGTTCCGAGGGGTTTTACGTGGTGTTTACACTGACAAGATCAGAACAAAAGGAAAAGGAAGGCTAAAGAGGGGTGAGTTGGTGGAACAAAATGGGATTGTTGCAGCTGCAAATGCCATTGAAAAGAAGATTAGAGATTTCAAGAGTGATGCTTTGAGATGGGCCGAAACAACGATGTCAGATATTAGAGGCTTAAGGAAATCTGGTCAATCTCTTGTAGTGATTGTTGGCTCGCCAAAGCTGACCGCGTACAACACTGACTTTGGTTGGGGGAAGCCCGTGAAGTCTGAAGTGGTGAATCTTGATTCTGTGGGAACAGTTTCTCTCTCTGATTGTAGGGACCAAGAAGGTGGAATTCAGGTTGGAATGGTACTCGAGAGGATTCGAATGAACAATTTCACCAGCATCTTGGAAGAACACCTTAGTCATGTTGCCGTTCTTGACTAA 1158 0.4793 MAQEMNEPAMNIIEQSQVAPPQGSLPSTIIPLTFLDIPWLLSRHARRIFFYDFPFPTTHFLQTALPILKHSLSHTLQHFFPFASNLILPPHPHVPYIRYLEGDSLSFTVAESSPADFTLLTSDSPRDSYDWQPLAPVLPSQRTSHDGTCEFPLMAIQVTMIPNSGFSICVIFDHVAGDGRTLHHFMKFWASVCKAKGDLDFPCSMPLPLYDRNIVKDPKGLMHVYMQDLRNSALLTKQFRGVLRGVYTDKIRTKGKGRLKRGELVEQNGIVAAANAIEKKIRDFKSDALRWAETTMSDIRGLRKSGQSLVVIVGSPKLTAYNTDFGWGKPVKSEVVNLDSVGTVSLSDCRDQEGGIQVGMVLERIRMNNFTSILEEHLSHVAVLD 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02676 385 PANTHER COUMAROYL-COA:ANTHOCYANIDIN 3-O-GLUCOSIDE-6''-O-COUMAROYLTRANSFERASE 1-RELATED 10 253 - -
Gma13g02676 385 PANTHER COUMAROYL-COA:ANTHOCYANIDIN 3-O-GLUCOSIDE-6''-O-COUMAROYLTRANSFERASE 1-RELATED 258 381 - -
Gma13g02676 385 PANTHER - 258 381 - -
Gma13g02676 385 Gene3D - 10 239 IPR023213 -
Gma13g02676 385 Pfam Transferase family 15 212 - -
Gma13g02676 385 Pfam Transferase family 270 375 - -
Gma13g02676 385 Gene3D - 253 381 IPR023213 -
Gma13g02676 385 PANTHER - 10 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02676 Gma-Chr13 41453055 41454461 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02676 26 216 Monolignol Biosynthesis Gene Families AT5G48930 25.500 1.81e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02676 - - gmx:100814714 525.783