Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02674 ATGGTAGTTCTTAGAGAACACAAACTTGTAGAAAAATTTCAGGTTGGTCCAGCAGTGAGAACAATCACCACTCTTCCCCTCACATTCCTTGATTTGCCTTTAGCAGGTCCTATTTATGTGAGACGCCAATTCTTCTATCACTTCCCCCACTCCACACTCCATTTCTGTGAAACCATACTTCCTTGTCTCAAAACCTCTCTCTCTCAAACCCTTCAACACTTCTTCCCTCTCGCTGGAAACCTCCTCTGTCCACCACCACCCCACAAACCCTTCATTCACTGCACCGGTGATGACTTTGTCACCTTAACCATCATTGAGTCCGAAGCAGATTTCAAAAATCTCTCATCCAACCGCCCCAAAAGCCTCAAAGATTTGGATCACTTGGTTCCCAAGTTAACATGCTCAAACACACACCATGACACGTTCATTTTCCCATTGGTAGCATTGCAAGCCACAGTTTTCCCCAACCATGGCCTTTGCATCGCGATCACGTATTGCCACGTGATGGATGATAGTTGTTGCAGCCATTTCATGAAGTCTTGGTCCTCCATTTGTCGAAGTGGTGGAGTTGACTTTACTCTTGTGGAGAAGTCAACACCTTGCTTCGATAGGGAAGTGTTGAAGGACCCCAAAGGACTCGAAGCTATCTTCTTAAGAGATTACTTTGAAGAGAGGTCAACTTGGAAGGTTGGTAAAACTTCTGAGGTTTCCAATGGAAATAGTGAAGATTATGTCAAAGCAACGATTGTTTTTGGAAGAGAAGATGTCGAGGGGCTGAGAAGATGGGTGCTAAATCAGTGGAAGAGAAGTAAGGAATTCAACACACCACAATATATATCAAAATTTGTGGTGACGTGTGCTTTTGTGTGGGCTAGTTTGGTTAAAACAAGATGCAGAAATGATGAAGAAGAAGATGTCAAAGAGGAGTTCTTTCGTTTCGCTGCAGATTGCAGAGATCGCCTTGAGCATCCTGTGCCAAAAACTTACTTTGGAAACTGCTTAACTCTCTGTTATGCAATGCTTAAGAGAGAAGACCTCAAGGGAGAGAGTGGTTTTGTGAATGCGGTCAAGGTCATTGAAAGGGCAGTGGCTGATATGAAAAGTGAACTCTTCAAAGATGCAGAAAATTGGAGGGAATCTTTTACGAAGATGTTTGTGTTGGGAAGCACTTTGATAGTTACAGGGTCACCAAAATTCACTGTTTATGAGACTGATTTTGGATTTGGAAGGCCTACCAAAGTGGAAATGGCACATTCCTTTAAGGGTATGTCTCTGGCCGAAACTGGGGATAATGAAGGAGGACTTGAGATTGGCTTGGTGTGCACAAGTACAGAATATGAATATTTAATTTCCCTCATTGAACAAGGACTTCAAATTTCAAAGTCTTAA 1389 0.4276 MVVLREHKLVEKFQVGPAVRTITTLPLTFLDLPLAGPIYVRRQFFYHFPHSTLHFCETILPCLKTSLSQTLQHFFPLAGNLLCPPPPHKPFIHCTGDDFVTLTIIESEADFKNLSSNRPKSLKDLDHLVPKLTCSNTHHDTFIFPLVALQATVFPNHGLCIAITYCHVMDDSCCSHFMKSWSSICRSGGVDFTLVEKSTPCFDREVLKDPKGLEAIFLRDYFEERSTWKVGKTSEVSNGNSEDYVKATIVFGREDVEGLRRWVLNQWKRSKEFNTPQYISKFVVTCAFVWASLVKTRCRNDEEEDVKEEFFRFAADCRDRLEHPVPKTYFGNCLTLCYAMLKREDLKGESGFVNAVKVIERAVADMKSELFKDAENWRESFTKMFVLGSTLIVTGSPKFTVYETDFGFGRPTKVEMAHSFKGMSLAETGDNEGGLEIGLVCTSTEYEYLISLIEQGLQISKS 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02674 462 Gene3D - 7 234 IPR023213 -
Gma13g02674 462 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 462 - -
Gma13g02674 462 Gene3D - 241 460 IPR023213 -
Gma13g02674 462 PANTHER - 1 462 - -
Gma13g02674 462 Pfam Transferase family 23 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02674 Gma-Chr13 41442974 41444680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02674 19 443 Monolignol Biosynthesis Gene Families AT5G48930 23.820 1.65e-18 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02674 - - gmx:100813644 949.503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02674 13 41442974 41444680 Gma13g02674 13 41442974 41444680 ECH
Gma13g02674 13 41442974 41444680 Gma12g01886 12 39524546 39526133 GST