Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02672 ATGGCTCAAGTGAAGATCTTAGAGCAAAGTGAAGTTGGTCCACCACCATGCTCACTTCCCTCAACCACCCTTCCCCTCACTTTCTTCGATATTCCATGGTTCTACTGCCACCCCATCCAACGCATCTTCTTCTATGACTTTCCCCACCCCACACACCACTTTCTCCAAACAGCACTTCCCATTCTCAAACACTCTCTTTCCCTAACCCTCCAACACTTCTTCCCCTTCTCCTCCAATCTCATCGTTCCTCCACAGCAACCCCATCTCTCTCACATACGCTACCTTGATGGAGACTCTCTCTCCTTCACCGTTGCAGAGTCCACCGCAGACTTCACCCTCCTCACATCAGATTCACCACAAGACGTTCCAAATTGGCACCCTCTTGTTCCCGCGTTTCCTACCCCACGTGTTGACCAAGATGGCGCACGTGTGTTCCCTCTTATGGCCATTCAGGTTACAATTTTCCCAAAGTCTGGCTTCACCATATGTCTCACCTTCAACCACCTTGCCAGCGACGGCAAGTCACTTCACCATTTCATCAAGTTCTGGGCCTCTCTTTGCAAAGCAAAAGGAAACATGGCTTCCCTTCAAACCTCTTTGTCTCTTCCTTCTCATGAGAGGGACAAAGTTAAAGATCCAAAGGGGCTTAAGCTCATTTACTTTCAAGAACTTGAACATCCTGAGTCCAGAAACATGGAGTTTGCGGGGCTCGTGAGAGAAGTCTCCTCTAACAAGGTTCGCTTCACAGTTGCATTGAGTCGTGAACAAGTTGAGAAATTTAAGAAATGGGTCTCTCTTAAATGCGCCAGCTACACTTCTGATGAGACATTGCACATATCAACCTTTGTGGTGACATGCTCCTTAATTTGGGTTTGCATGATTAGGTTAGAGGAGAGCAAAGGCAATTATGTTGCACAAGATTATGCTGAATTCTGCCACTTGGTGTTTCTTGCAGATTGTCGTGGTCGTCCTGAGTTTTCATTACCTTCAACGTACTTTGGGAATTGTCTAACCACTTGTTTTGTGGCTATGAAGAGGAGTGAGATAGTGGGAGAAAATGGGATCATTGGGGTGGCAAAGGCTATTGAAAGGCAAATTAGAGATTTGAAGAGTGATGCTTTGAGAAATGCTGAAAGGTTGATGTCATATTATAGAGAGTTAGGGAAACCAGGAAAATCTGTGTTGGTAGTTGCGGGGTCACCAAAATTGGGTGTGTATCATACTGATTTTGGATGGGGTAAGCCTAAGAAATCTGAAGCAGCGCATATTGAATCGTCAGGATCAATTTCTCTTTCTGATTGTAGAGATGAAAACGGAGGAATTGAGGACCTTGCAAGATGCAAGGAGGAACTGCGAAGAAGTGTTTTGGTTCAGTCTGGGAGTGAAGAGGAGGAGATGCTAATTAAACTTTTGATTTCCACTGTGTGGCTTTTTGGCTCTACGCGCTGA 1449 0.4555 MAQVKILEQSEVGPPPCSLPSTTLPLTFFDIPWFYCHPIQRIFFYDFPHPTHHFLQTALPILKHSLSLTLQHFFPFSSNLIVPPQQPHLSHIRYLDGDSLSFTVAESTADFTLLTSDSPQDVPNWHPLVPAFPTPRVDQDGARVFPLMAIQVTIFPKSGFTICLTFNHLASDGKSLHHFIKFWASLCKAKGNMASLQTSLSLPSHERDKVKDPKGLKLIYFQELEHPESRNMEFAGLVREVSSNKVRFTVALSREQVEKFKKWVSLKCASYTSDETLHISTFVVTCSLIWVCMIRLEESKGNYVAQDYAEFCHLVFLADCRGRPEFSLPSTYFGNCLTTCFVAMKRSEIVGENGIIGVAKAIERQIRDLKSDALRNAERLMSYYRELGKPGKSVLVVAGSPKLGVYHTDFGWGKPKKSEAAHIESSGSISLSDCRDENGGIEDLARCKEELRRSVLVQSGSEEEEMLIKLLISTVWLFGSTR 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02672 482 PANTHER - 4 442 - -
Gma13g02672 482 Gene3D - 242 453 IPR023213 -
Gma13g02672 482 Gene3D - 1 234 IPR023213 -
Gma13g02672 482 Pfam Transferase family 15 442 - -
Gma13g02672 482 PANTHER COUMAROYL-COA:ANTHOCYANIDIN 3-O-GLUCOSIDE-6''-O-COUMAROYLTRANSFERASE 1-RELATED 4 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02672 Gma-Chr13 41424824 41426922 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02672 61 415 Monolignol Biosynthesis Gene Families AT5G48930 23.138 1.31e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02672 - - gmx:100797294 899.042
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02672 13 41424824 41426922 Gma13g02672 13 41424824 41426922 ECH
Gma13g02672 13 41424824 41426922 Gma12g01887 12 39538764 39540194 GST