Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02656 ATGGGTGAGGAGAGATCTGGTTCACAGAACAAAAGAGTGAAGATCTATGGAGAAGTTCTATTGGGATTTATAATTATGTTAATCTGCACAGTCCAGTTTTCACTTGCAGACACTGATCCCATTGATGCAGTTGCTGCAATTAATAGATTGTATACTGCATTGGGAAACCCTGTTCTTCCTGGATGGGTTTCTAGTGCGGGAGACCCGTGCGGAGAAGGGTGGCAAGGTGTTCAATGTAATGGTTCAGTCATACAAGAAATAATTCTGAATGGTGCAAACTTGGGAGGAGAACTGGGTGATAGCTTGGGAAGTTTTGTTTCTATCagagcaatAGTTCTAAACAACAATCACATTGGGGGAAATATTCCATCCAGTTTGCCAGTCACTTTACAGCACTTCTTTCTTTCAGATAATCAGTTCACTGGAAGTATTCCAGCCTCTTTATCCACATTGACTGAACTGACTGACATGTCTCTTAACGGCAATCTTTTAACAGGAGAAATACCAGATGCATTTCAGTCTCTTACACAATTGATCAATCTAGATTTATCTAATAACAATTTGAGTGGGGAATTGCCTCCATCCATGGAGAATTTGTCAGCTCTTACCAGTGTACATTTACAGAACAATAACCTGTCTGGGACCCTGGATGTTTTACAAGGCCTTCCACTGCAAGATTTGAATGTTGAGAACAACCAGTTTGCTGGACCAATACCTCCAAAGTTGTTAAGCATCCCTAGCTTCAGAAAAGATGGAAACCCGTTTAATCTCAATGGCAATTCTACTATAGCCCCAGCACATCCACCTCGTTCTCCAGTGCCAGCAACACCATCAGGAACTGTGGCTTCTGTGACGCCATCGTCTGGACGTATACCTACTAAACCGACCGAGGGACCAACTGCAGCAAAGGAATCAAATTCTGAGAAATCGAAAAAAAACACCAAAAAGGTGGTTTGGATATCTGTTTCTGGTATATTGGTGTTTATAATTCTAGTACTGGGACTTCTTCTCTTCGTTCCAAGATGTAGCAAAAGAGAATGGGTTAACAGAAGTTCCAAGCAACATCAAGTTGGCGCATATGGAGTTGAAAGACAGAATCCTAGGGAATATGGAGCTTTTGTCCAACCACCTAACCAAACTGAGAAAGTACCAAAAGGTGCTATTGTGAGGCCGAAAGGGGATCATCAAGAAGAGGCAAGGAGAGTGAGGGCTATTCCAAATCCACAAGGCGAGCAAGAAAAGGATGAACAAAGAATGGAAACAATCCCAAAGCTGTTAGAGCATGAGATAGATATGAGTTCATTAGATGTATTTTCAATGCCTTCTCCACCGCCACCTCCTCCACCACTTCCTGTTGAGAGGGTGATTGTTGAACCAACCTTATTCCACAAAGAGGCTAACATCAATCCTCCCAAAAAAAGTCCAGTTCCTCCCACTTTTGCAAAAACTTTCACCATCGCATCCCTTCAACAGTATACAAATAGCTTTTCTCAAGACAATCTTATAGGTTTAGGCATGCTGGGGAGTGTGTATAGGGCAGAGCTTCCAGATGGAAAGATACTTGCTGTGAAGAAACTAGACAAGAGAGTTTCTGATCAACAAACAGATGATGAGTTTCTCGAATTGATAAACAGTATTGACAGAATCCGGCATCCAAATATTGTTGAGCTTATTGGGTACTGTGCAGAGCATGGCCAAAGGCTTCTTATTTATGAGTATTGCAGTAATGGGTCGTTGCAGGATGCACTCCATTCAGATGATGAATTCAAAACAAGATTGTCATGGAATGCTCGCATTCGGATAGCACTCGGGGCAGCTAGAGCCTTAGAGTACTTGCATGAGCAGTTTCAGCCATCTGTTGTGCACAGAAATTTCAAGTCTGCTAACATTCTCCTCGATGATGATGTTTCTGTGCGCGTATCTGATTGTGGTTTGGCTCCACTAATAACTAAAGGTTCTGTAAGTCAGCTCTCAGGACAACTGCTAACAGCATATGGCTATGGGGCTCCTGAGTTTGAGTCAGGAATTTACACATATCAGAGTGATATTTACAGCTTTGGAGTAGTTATGTTAGAACTTTTGACAGGCCGTCAGTCCTACGACAGGACACGCCCTCGAGGGGAGCAGTTTCTGGTGAGGTGGGCTATTCCTCAGCTTCATGACATTGATGCATTATCAAAGATGGTTGATCCTTCTCTAAAAGGAAATTACCCTGCCAAATCATTGTCAAATTTTGCAGACATTATTTCTAGATGTGTTCAGTCAGAGCCAGAATTTAGGCCAGCAATGTCAGAAGTGGTCTTTCTCCATCTTCCCCTTCTCATCTCACTCACTCTTCTTCTCTCCATCTCCCTCTTCATTGCGGGTAGCACTTGTGTGGATCCTCTCGACGGGGACAGTGTGACTGATCAGGTTGACTTCGAACATGTCATTGTCTTTGACGTAGAACTTGGCCTGTGA 2460 0.4276 MGEERSGSQNKRVKIYGEVLLGFIIMLICTVQFSLADTDPIDAVAAINRLYTALGNPVLPGWVSSAGDPCGEGWQGVQCNGSVIQEIILNGANLGGELGDSLGSFVSIRAIVLNNNHIGGNIPSSLPVTLQHFFLSDNQFTGSIPASLSTLTELTDMSLNGNLLTGEIPDAFQSLTQLINLDLSNNNLSGELPPSMENLSALTSVHLQNNNLSGTLDVLQGLPLQDLNVENNQFAGPIPPKLLSIPSFRKDGNPFNLNGNSTIAPAHPPRSPVPATPSGTVASVTPSSGRIPTKPTEGPTAAKESNSEKSKKNTKKVVWISVSGILVFIILVLGLLLFVPRCSKREWVNRSSKQHQVGAYGVERQNPREYGAFVQPPNQTEKVPKGAIVRPKGDHQEEARRVRAIPNPQGEQEKDEQRMETIPKLLEHEIDMSSLDVFSMPSPPPPPPPLPVERVIVEPTLFHKEANINPPKKSPVPPTFAKTFTIASLQQYTNSFSQDNLIGLGMLGSVYRAELPDGKILAVKKLDKRVSDQQTDDEFLELINSIDRIRHPNIVELIGYCAEHGQRLLIYEYCSNGSLQDALHSDDEFKTRLSWNARIRIALGAARALEYLHEQFQPSVVHRNFKSANILLDDDVSVRVSDCGLAPLITKGSVSQLSGQLLTAYGYGAPEFESGIYTYQSDIYSFGVVMLELLTGRQSYDRTRPRGEQFLVRWAIPQLHDIDALSKMVDPSLKGNYPAKSLSNFADIISRCVQSEPEFRPAMSEVVFLHLPLLISLTLLLSISLFIAGSTCVDPLDGDSVTDQVDFEHVIVFDVELGL 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02656 819 Pfam Leucine rich repeat N-terminal domain 43 80 IPR013210 -
Gma13g02656 819 Pfam Leucine rich repeat 129 188 IPR001611 GO:0005515
Gma13g02656 819 PANTHER OS01G0253100 PROTEIN 31 768 IPR045271 GO:0004714|GO:0006468
Gma13g02656 819 SUPERFAMILY Protein kinase-like (PK-like) 471 768 IPR011009 -
Gma13g02656 819 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 1-RELATED 31 768 - -
Gma13g02656 819 Gene3D Transferase(Phosphotransferase) domain 1 574 771 - -
Gma13g02656 819 SUPERFAMILY L domain-like 54 247 - -
Gma13g02656 819 MobiDBLite consensus disorder prediction 276 303 - -
Gma13g02656 819 Gene3D Ribonuclease Inhibitor 44 267 IPR032675 -
Gma13g02656 819 Gene3D Phosphorylase Kinase; domain 1 463 573 - -
Gma13g02656 819 Pfam Protein tyrosine and serine/threonine kinase 499 767 IPR001245 GO:0004672|GO:0006468
Gma13g02656 819 ProSiteProfiles Protein kinase domain profile. 496 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02656 819 MobiDBLite consensus disorder prediction 254 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02656 Gma-Chr13 41298571 41306081 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02656 33 767 Strubbelig Receptor Gene Family AT4G03390 62.800 0.0 860
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Gma13g02656 PK_Tyr_Ser-Thr 6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02656 - - gmx:100811490 1437.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02656 13 41298571 41306081 Gma12g01904 12 39662975 39669156 GST
Gma13g02656 13 41298571 41306081 Gma12g00968 12 10101471 10108530 PCT
Gma13g02656 13 41298571 41306081 Gma06g02653 06 50053146 50060013 PCT
Gma12g00968 12 10101471 10108530 Gma13g02656 13 41298571 41306081 PCT
Gma06g02653 06 50053146 50060013 Gma13g02656 13 41298571 41306081 PCT