Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02650 ATGGGCTGTTGTGTTTCAACAAGCAGTCAGAGTACTTGTAGCAGCGGGAGCAATGGAGACACGATCGCTCCAACGTGTCTAGAGATCGGATTCTGTGGTCAAAAGAGTGCAAGGAGAACATTCTCTGATCATGTTGTCTCTCTGCACCAATTACCATCCTTACCAAACAGAATTTTCACCAATGGAAAGAGCAGGTCTTCTTGCATATTTACACAGCAGGGTCGAAAGGGTATTAATCAGGACGCCATGATTGTGTGGGAAGATTTCATGTCTGAAGATGTGACCTTTTGTGGTGTCTTTGATGGCCATGGTCCGCACGGTCACCTTGTTGCACGCAAAGTCAGGGAAGCCTTGCCGCTAAAACTGCTTTCATTTTTGCATTCTTCTGAATCAGGGCGAAATGGTTCAGGTAAAGCTTGTTTTAGGAGCAACATAAAGCCTGAAAGTGGAGAATCTGAGAAAGGTTTGTCTGCTGAAGATGAAGAAAATTCTATGTGGAGAGAAGCTTTCATGAAGGCATACAAGGCTATGGATAAAGTGTTGAGGTCTCATCCAAATTTGGACTGCTTCTGTAGTGGAAGCACAGCTGTCACTATAGTGAAGCAGGGTTCAAATTTGTTCATGGGAAATATTGGGGATTCCCGAGCAATCATGGGATCCAAGGACGGCAATGACTCCATGGTGGCAATTCAGTTGACCATTGATTTGAAGCCTGATTTGCCAAGGGAAGCAGAACGAATCAAACAGTGCAAGGGTAGGGTATTTGCATTACAAGATGAGCCAGAAGTTCATAGGGTATGGTTGCCTTTTGATGATGCACCAGGATTAGCAATGGCTAGAGCATTTGGAGATTTTTGCTTGAAGGAATATGGTGTGATTTCTATACCAGAATTTTCTCATCGGCTGCTAACAGACAAAGATCAGTTCATTGTTCTTGCCTCAGATGGGGTCTGGGATGTTTTGAGCAATGAAGAGGTGGTTAGGATAATATCTTCAGCGCCAACTCGATCATCAGCAGCGAGGACTCTGGTGGATTCCGCAGCTCGTGAGTGGAAACTTAAATATCCTACTTCAAAAATGGATGACTGTGCAGTTGTGTGCCTATTTTTGGATGGAAAAATGGACTCAGAATCTGATTGTGATGAGCAATGCTCCTCTTCTGCAACCATCCAGAAGAACCATTGGGGTAATCCGGTTGAGTCAGATGACAGTCAAAAGCCTGAGCCATCTTTGCGAAGGAACTTTACTGTGAGATCCTCAGAAGAAAATGAAACCTATGGAGGAGGAGGAGTTGAAGAGGTATCTGTTGGTGTTGAAGATAGAACATCAGCGGCTGAAGATCAACACTGGTCTGGTCTGGAGGGTGTCACGCGAGTAAACTCACTGGTTCAACTTCCTAGATTTTCTGAGGAAAGGCCAAACTCTTGA 1428 0.4454 MGCCVSTSSQSTCSSGSNGDTIAPTCLEIGFCGQKSARRTFSDHVVSLHQLPSLPNRIFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMSEDVTFCGVFDGHGPHGHLVARKVREALPLKLLSFLHSSESGRNGSGKACFRSNIKPESGESEKGLSAEDEENSMWREAFMKAYKAMDKVLRSHPNLDCFCSGSTAVTIVKQGSNLFMGNIGDSRAIMGSKDGNDSMVAIQLTIDLKPDLPREAERIKQCKGRVFALQDEPEVHRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDKDQFIVLASDGVWDVLSNEEVVRIISSAPTRSSAARTLVDSAAREWKLKYPTSKMDDCAVVCLFLDGKMDSESDCDEQCSSSATIQKNHWGNPVESDDSQKPEPSLRRNFTVRSSEENETYGGGGVEEVSVGVEDRTSAAEDQHWSGLEGVTRVNSLVQLPRFSEERPNS 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02650 475 SUPERFAMILY PP2C-like 59 372 IPR036457 -
Gma13g02650 475 MobiDBLite consensus disorder prediction 391 452 - -
Gma13g02650 475 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 463 - -
Gma13g02650 475 CDD PP2Cc 65 370 IPR001932 -
Gma13g02650 475 MobiDBLite consensus disorder prediction 399 419 - -
Gma13g02650 475 Gene3D - 58 378 IPR036457 -
Gma13g02650 475 ProSiteProfiles PPM-type phosphatase domain profile. 66 370 IPR001932 -
Gma13g02650 475 Pfam Protein phosphatase 2C 92 348 IPR001932 -
Gma13g02650 475 SMART PP2C_4 55 368 IPR001932 -
Gma13g02650 475 PANTHER ALPHABET, ISOFORM E-RELATED 1 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02650 Gma-Chr13 41243812 41246423 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02650 1 475 PP2C-type Phosphatase Gene Family AT1G03590 69.102 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02650 - - gmx:100788149 934.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02650 13 41243812 41246423 Gma12g01910 12 39731100 39734195 GST
Gma13g02650 13 41243812 41246423 Gma12g00975 12 10459938 10468563 PCT
Gma13g02650 13 41243812 41246423 Gma06g02648 06 49973748 49979416 PCT
Gma12g00975 12 10459938 10468563 Gma13g02650 13 41243812 41246423 PCT
Gma06g02648 06 49973748 49979416 Gma13g02650 13 41243812 41246423 PCT