Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma13g02605 | ATGTTGGCGGTGTCACCTTTGAGGAGCACAAGAGATGAAGGAGGGCAAGGAGAGATATTGGAGAGTGTCTCAATTGGAACCGATGATTTTGCTGACCTTTCCGAAGGGAACTTGCTTGAAAGCATCAACTTCGATGATTTCTTCATGGGAATCAATGATGATGGAGATGTCTTGCCGGATCTGGAGATGGACCCTGAGATGCTTGCTGAGTTCTCCCTCAGTACCGAGGATTCCGAGATAGCCTCATCGTCAGTTTCAGTGGCAAATAACAACAATGATGGGAATAATATAGTTACTACTACTGAAAAACAAGATGATGAGGTTATTATTATAGCATCCAATTCTTCTTCAGATTCGGGTTCGAGTCAAGGGGAGGAGATAGTAAGCAAGAGTGATGAATCAGAGGTGGTGGTGAATCCATCCCCTAAGGAAAGTGAGAAAGGAAGAAAATCATCAAATCATGCATCAAGGAATAATAATCAAGGGAAGAGAAAGGTTAAGGTGGATTGGACCCCAGAATTGCACAGGCGATTCGTGCAAGCAGTGGAGCAGCTTGGAGTGGATAAGGCTGTGCCTTCTAGGATTTTGGAGATTATGGGAATTGACTGCCTCACCCGCCATAACATTGCAAGCCACCTTCAAAAATATAGATCGCACAGGAAGCATTTGCTAGCGCGTGAAGCTGAAGCAGCAAGGTGGAGTCAAAGGAAGCAATTGTTGGGTGCAGCAGGTGCAGGTAGAGGAGGAGGAAGCAAGAGAGAAGTAAACCCTTGGCTTGCACCAACCATGGGCTTCCCTCCCATGTCACCAATGCACCACTTTAGACCTTTACATGTATGGGGGCATCACAACATGGACCAGTCTTTCATGCACATGTGGCCTAAACATCCACCATACTCGCCATCGCCGCCTGCATGGCCACCACGAACCGCTCCGTCTCCGCCGTCTCCGGACCCTCTATATTGGCACCAACATCAACTGGCTCCAAACGCGCCAACCACAGGAACACCGTGTTTTCCACAACCTCTGACAACCACGAGATTTGGGTCTCAAACTGTTCCGGGAATCCCACCACGCCATGCAATGTACCAAATTGTAGATCCAGGCATTGGCATCCCGGCCAGCCAACCGCCACCTCGACCCCTTGTCGACTTTCATCCGTCAAAGGAGAGCATAGACGCAGCTATTAGTGATGTTTTATCAAAACCATGGCTGCCACTACCTCTTGGCCTTAAAGCTCCAGCACTTGATGGTGTAATGGGTGAATTACAAAGACAAGGGATTCCCAAAATCCCTCCCTCTTGTGCTTGA | 1311 | 0.4828 | MLAVSPLRSTRDEGGQGEILESVSIGTDDFADLSEGNLLESINFDDFFMGINDDGDVLPDLEMDPEMLAEFSLSTEDSEIASSSVSVANNNNDGNNIVTTTEKQDDEVIIIASNSSSDSGSSQGEEIVSKSDESEVVVNPSPKESEKGRKSSNHASRNNNQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHLLAREAEAARWSQRKQLLGAAGAGRGGGSKREVNPWLAPTMGFPPMSPMHHFRPLHVWGHHNMDQSFMHMWPKHPPYSPSPPAWPPRTAPSPPSPDPLYWHQHQLAPNAPTTGTPCFPQPLTTTRFGSQTVPGIPPRHAMYQIVDPGIGIPASQPPPRPLVDFHPSKESIDAAISDVLSKPWLPLPLGLKAPALDGVMGELQRQGIPKIPPSCA | 436 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma13g02605 | 436 | PANTHER | TRANSCRIPTION FACTOR MYB-HB-LIKE FAMILY-RELATED | 1 | 436 | - | - | |
Gma13g02605 | 436 | Pfam | Myb-like DNA-binding domain | 168 | 217 | IPR001005 | - | |
Gma13g02605 | 436 | MobiDBLite | consensus disorder prediction | 82 | 168 | - | - | |
Gma13g02605 | 436 | PANTHER | TRANSCRIPTION ACTIVATOR GLK1 | 1 | 436 | IPR044825 | GO:0003700|GO:0045893 | |
Gma13g02605 | 436 | MobiDBLite | consensus disorder prediction | 82 | 127 | - | - | |
Gma13g02605 | 436 | MobiDBLite | consensus disorder prediction | 128 | 153 | - | - | |
Gma13g02605 | 436 | Gene3D | - | 162 | 223 | - | - | |
Gma13g02605 | 436 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 162 | 221 | IPR017930 | - | |
Gma13g02605 | 436 | SUPERFAMILY | Homeodomain-like | 163 | 222 | IPR009057 | - | |
Gma13g02605 | 436 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 165 | 219 | IPR006447 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma13g02605 | Gma-Chr13 | 40873966 | 40878207 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma13g02605 | 1 | 331 | G2-like Transcription Factor Family | AT5G44190 | 38.655 | 1.30e-60 | 199 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GARP-G2-like | Gma13g02605 | Myb_DNA-binding | 5.6e-08 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma13g02605 | - | - | gmx:100775671 | 763.066 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma13g02605 | 13 | 40873966 | 40878207 | Gma13g02605 | 13 | 40873966 | 40878207 | ECH | |
Gma13g02605 | 13 | 40873966 | 40878207 | Gma12g01950 | 12 | 40117481 | 40121961 | GST | |
Gma06g02596 | 06 | 49250940 | 49256208 | Gma13g02605 | 13 | 40873966 | 40878207 | PCT |