Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02603 ATGCTTCAGCAGCTATTGCTGTTTCTGCTTCTCTCTCTACCCCCCACTCTCTCTCTAAACCAAGACGGCCTCTTCCTCCTCCAAGCCAAACTCCAACTCTCCGACCCCCAAAACGCCCTCTCCGACTGGAACCACCGCGACGCCACCCCATGCAACTGGACCGCCGTCACGTGCGACGCCGCAACCGGAGGCGTCGCCACTCTCGACTTCTCCAACCTCCAACTCTCCGGCCCCGTCCCCGCCACCACCCTCTGCCGCCTCCCCTCGCTCGCCTCCCTCAACTTTTCCTACAACAACCTCAACGCCACCCTCCCCGCCGCCGCGTTCTCCGCCTGCGCCGCCCTCCTCCACCTCGACCTTTCCCAGAACCTCCTCTCCGGCGCCATCCCCGCCACCCTCCCCGACTCCCTCGTCACCCTTGACCTCTCCTGCAACAACTTCTCCGGCGATATTCCGGCGAGCTTCGGCCAGCTCCGGCAACTCCAATCTCTCTCCCTTGTCAGTAACCTCCTCGCCGGAACCCTCCCCTCTTCCCTCGGCAATATTTCAACCCTCAAAATACTTCGCCTCGCTTACAACACCTTCGACGCCGGTCCCATTCCGAAAGAGTTCGGAAACCTCAAAAATCTCGAGGAGCTCTGGCTCGCAGGTTGCAGCCTTGTGGGCCCCATTCCACCCTCTTTAGGAAGGTTAAGTAATCTTTTGAACCTCGACCTGTCGCAGAACAACCTCGTCGGAGACATACCCGAACAACTCGTATCGGGTTTGCGCAACATTGTACAAATCGAACTCTACGAAAACTCTCTCTCCGGCGCGTTGCCACGCGCCGCGTTTACAAACCTCGCCAACTTAGAAAGATTCGATGCCTCCACGAACGAGTTGACTGGGACGATTCCAGAAGAGTTGTGTGGGTTGAAGAAACTCGGGTCGTTGAATTTGTACGAAAATAAGCTCGAGGGTTCTTTGCCGGAGACTATAGTGAAATCGTTGAACTTGTACGAGTTGAAGCTGTTCAACAACTCGCTCACTGGGTCGTTGCCGAGTGGGTTGGGTAAAAACTCGAAGTTGCAGTCTCTCGACGTTTCTTATAACCGATTCTCCGGCGAGATTCCGGCGAGATTGTGCGACGGGGGAGCGTTGGAGGAGCTGATTCTGATATACAATTCGTTTTCCGGGAGGATCCCGGAGACTCTCGAGGAATGCAAGAGTTTGAGGAGGGTTCGGCTTGGGAACAATAACTTTTCTGGCGTTGTGCCTGAAGGGTTATGGGGTTTGCCCCATTTGTATTTGTTGGAGCTTGTTTATAATTCTCTTTCTGGGTCGATTTCCAATTCGATTTCCGGGGCTTGGAACTTGTCAATGTTGTTAATTTCCGGGAATAAGTTTTCTGGGTCGATTCCTGAGGGGGTTGGGGAATTGGGTAATCTTGAAAAGTTTGTAGCTAATAATAATAGTCTTACTGGTCGGATTCCGAAAAGTGTGTTTAGGTTGAGTCAGTTGGATAGGCTTGTTCTCGGAGACAATCAGCTTTTCGGAGAAATTCCTGTTGGAGTTGGTGGTTGTAAGAAGCTCAATGAGCTTGATTTGGCGAATAATAGGTTAGGTGGGAGTATTCCTAAGGAGTTAGGGGACCTGCCTGTGCTTAATTATCTTGATCTTTCAGGGAATCAGTTCTCTGGTGAGATTCCAATTGAGCTGCAGAAGTTGAAGCCTGATTTGTTGAATTTGTCGAACAATCAGCTTTCTGGGGTGATTCCTCCTCTTTATGCTAATGAGAATTATAGAAAGAGTTTTCTTCGGAATCCTGGTTTATGCAAGGCTCTCTCTGGATTGTGTCCAAGCTTGGGTGGTGAGAGTGAGGGTAAGAGCAGAAAGTATGCGTGGATTTTCCGGTTCATATTTGTGCTTGCTGGGATTGTGTTAATTGTTGGGGTGGCTTGGTTTTACTTCAAATTCCGGGACTTCAAGAAGATGAAAAAGGGGTTTCACTTTTCAAAGTGGAGGTCGTTTCATAAGCTGGGTTTTAGTGAGTTTGAGATTATTAAATTGCTGAGTGAGGATAATGTAATAGGGAGTGGAGCATCTGGGAAGGTTTACAAAGTTGCGCTGAGTAATGGCGAGTTGGTGGCAGTTAAGAAATTGTGGAGAGCAACTAAGATGGGAAATGAATCTGTTGATTCTGAGAAGGACGgttttgaagttgaggttgaaacattgggaaagattcggcacaagaatattgtgagattatggtgttgctgcaacagtaaagacagcaagctcttggtttatgagtacatgccgaatggaagtcttgctgatttgttgcacaatagcaagaaaagcttgttggattggcccaccagatacaaaattgctattgatgctgccgaggggctctcatatttgcatcatgattgtgttccctccattgttcatagggatgtcaaatctagcaatatcttgctagatgatgaatttggagcaaaagttgccgattttggagttgccaaaatttttAAGGGAGCCAACCAAGGGGCGGAGTCCATGTCTGTGATTGCCGGATCTTATGGTTATATCGCACCAGaatatgcttatacacttcgggtgaatgaaaagagtgacatttatagctttggtgtggtCATTTTGGAGTTGGTAACTGGGAAGCTCCCTCTTGACCCAGAGTATGGAGAAAATGATCTAGTAAAATGGGTTCAGTCCACATTAGATCAGAAAGGACTGGATGAGGTGATTGATCCCACTTTGGATATTCAATTTAGGGAAGAAATCAGTAAGGTACTCAGCGTGGGGCTTCATTGCACTAACTCTCTTCCTATAACCCGCCCTTCAATGCGTGGTGTGGTTAAAAAGCTGAAGGAAGTAACTGAACTTCCAAAATCCTTAAGTGGAAAACTCTCTTCTCCTTATTTTCAGGAAGAGGCTTCGGATATTGATCATGAGGGAAGCTTAGTTTGA 2979 0.429 MLQQLLLFLLLSLPPTLSLNQDGLFLLQAKLQLSDPQNALSDWNHRDATPCNWTAVTCDAATGGVATLDFSNLQLSGPVPATTLCRLPSLASLNFSYNNLNATLPAAAFSACAALLHLDLSQNLLSGAIPATLPDSLVTLDLSCNNFSGDIPASFGQLRQLQSLSLVSNLLAGTLPSSLGNISTLKILRLAYNTFDAGPIPKEFGNLKNLEELWLAGCSLVGPIPPSLGRLSNLLNLDLSQNNLVGDIPEQLVSGLRNIVQIELYENSLSGALPRAAFTNLANLERFDASTNELTGTIPEELCGLKKLGSLNLYENKLEGSLPETIVKSLNLYELKLFNNSLTGSLPSGLGKNSKLQSLDVSYNRFSGEIPARLCDGGALEELILIYNSFSGRIPETLEECKSLRRVRLGNNNFSGVVPEGLWGLPHLYLLELVYNSLSGSISNSISGAWNLSMLLISGNKFSGSIPEGVGELGNLEKFVANNNSLTGRIPKSVFRLSQLDRLVLGDNQLFGEIPVGVGGCKKLNELDLANNRLGGSIPKELGDLPVLNYLDLSGNQFSGEIPIELQKLKPDLLNLSNNQLSGVIPPLYANENYRKSFLRNPGLCKALSGLCPSLGGESEGKSRKYAWIFRFIFVLAGIVLIVGVAWFYFKFRDFKKMKKGFHFSKWRSFHKLGFSEFEIIKLLSEDNVIGSGASGKVYKVALSNGELVAVKKLWRATKMGNESVDSEKDGFEVEVETLGKIRHKNIVRLWCCCNSKDSKLLVYEYMPNGSLADLLHNSKKSLLDWPTRYKIAIDAAEGLSYLHHDCVPSIVHRDVKSSNILLDDEFGAKVADFGVAKIFKGANQGAESMSVIAGSYGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGKLPLDPEYGENDLVKWVQSTLDQKGLDEVIDPTLDIQFREEISKVLSVGLHCTNSLPITRPSMRGVVKKLKEVTELPKSLSGKLSSPYFQEEASDIDHEGSLV 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02603 992 Gene3D Ribonuclease Inhibitor 257 614 IPR032675 -
Gma13g02603 992 Gene3D Phosphorylase Kinase; domain 1 666 766 - -
Gma13g02603 992 SMART LRR_typ_2 87 111 IPR003591 -
Gma13g02603 992 SMART LRR_typ_2 256 280 IPR003591 -
Gma13g02603 992 SMART LRR_typ_2 305 329 IPR003591 -
Gma13g02603 992 SMART LRR_typ_2 231 255 IPR003591 -
Gma13g02603 992 SMART LRR_typ_2 158 182 IPR003591 -
Gma13g02603 992 SMART LRR_typ_2 354 377 IPR003591 -
Gma13g02603 992 SMART LRR_typ_2 497 521 IPR003591 -
Gma13g02603 992 SMART LRR_typ_2 545 576 IPR003591 -
Gma13g02603 992 Pfam Protein kinase domain 686 955 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02603 992 Pfam Leucine Rich repeat 352 369 IPR001611 GO:0005515
Gma13g02603 992 ProSitePatterns Serine/Threonine protein kinases active-site signature. 811 823 IPR008271 GO:0004672|GO:0006468
Gma13g02603 992 SUPERFAMILY Protein kinase-like (PK-like) 682 959 IPR011009 -
Gma13g02603 992 SMART serkin_6 684 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02603 992 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 5 965 - -
Gma13g02603 992 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 5 965 - -
Gma13g02603 992 ProSitePatterns Protein kinases ATP-binding region signature. 690 713 IPR017441 GO:0005524
Gma13g02603 992 Gene3D Transferase(Phosphotransferase) domain 1 767 972 - -
Gma13g02603 992 SUPERFAMILY RNI-like 322 587 - -
Gma13g02603 992 SUPERFAMILY L domain-like 35 371 - -
Gma13g02603 992 Pfam Leucine rich repeat N-terminal domain 20 59 IPR013210 -
Gma13g02603 992 Gene3D Ribonuclease Inhibitor 19 177 IPR032675 -
Gma13g02603 992 Gene3D Ribonuclease Inhibitor 178 256 IPR032675 -
Gma13g02603 992 ProSiteProfiles Protein kinase domain profile. 684 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02603 Gma-Chr13 40847346 40850805 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02603 14 984 Receptor kinase-like Gene Family AT1G28440 59.334 0.0 1116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gma13g02603 Pkinase 3.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02603 - - gmx:100778128 1682.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02603 13 40847346 40850805 Gma13g02603 13 40847346 40850805 ECH
Gma13g02603 13 40847346 40850805 Gma12g01952 12 40145439 40148942 GST