Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02571 ATGGACTCCATCGCCGGAGCTCCGCCACACGCCGACGTCACCCCTCCGCCGCCTCGGCAGTCGCCGTTCCCCGGCCGGGAAGACTGCTGGTCGGAGGAAGCCACGTTTACGCTCATCGAGGCGTGGGGCCAGCGCCACCTCGAACTCAACCGCGGCAACCTCCGCCAGCGCCACTGGCAGGAGGTCGCCGACGCCGTCAACGCCCGCCACGGCCACGTCAGCACCAAGGCCCGCCGCACCGACGTCCAGTGCAAGAACCGCATCGACACGCTTAAGAAGAAGTACAAGATCGAGAAGGCTAGGGTTTCCGATTCCGGCGACTCCGCCACCACCTGGCCCTTCTTCCGCCGCCTCGATTTTCTCATCGGCGACAATTTCCCCGCCAAGAAGCCCTCCCCGCCCGCCACCGCCGGAATAACTCGCCGGAGCACCCCGCCGGCCAAGTCCCCGCCTTGGGCGGTCATTCCGGTCGGCCCTCGATCCGGAACAAAGAAGCGGCCGGCGGCGGCGAAGCCGGCGTCGGCCTCGCCGGATAGCGTCGCCAACTCGTACTTCCGCCGGAATTTCTCCGTGTTCGCAGCCGCGGCAGCGGCGGCGGCGGCGGCGGCGGCCGACAGCGAGAATTCGAATGGTTCGAAATGGAGCAGTGGGAGTGAGAAAGGGACGATGAAGAAGAAAAGAACAAGAGGAGATTGGGAATTTGGGTACAGAGAGATGGCAGAGGCGTTGGAGAAGTTTGGGGAGATTTATGAGAGAGTGGAGGGAGCGAAACAGAGGCAAATGGTGGAATTGGAGAAACAGAGGATGCAGTTTGCTAAGGATTTGGAAACCCAGAGAATGAAACTCTTCATGGAAACTCAGGTTCACTTGCAGAAAATCAACCGCTCCAAACGTTCTTCTGCTTCTGACAGTGTTTCATAG 921 0.6135 MDSIAGAPPHADVTPPPPRQSPFPGREDCWSEEATFTLIEAWGQRHLELNRGNLRQRHWQEVADAVNARHGHVSTKARRTDVQCKNRIDTLKKKYKIEKARVSDSGDSATTWPFFRRLDFLIGDNFPAKKPSPPATAGITRRSTPPAKSPPWAVIPVGPRSGTKKRPAAAKPASASPDSVANSYFRRNFSVFAAAAAAAAAAAADSENSNGSKWSSGSEKGTMKKKRTRGDWEFGYREMAEALEKFGEIYERVEGAKQRQMVELEKQRMQFAKDLETQRMKLFMETQVHLQKINRSKRSSASDSVS 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02571 306 MobiDBLite consensus disorder prediction 129 179 - -
Gma13g02571 306 PANTHER SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR 3 303 - -
Gma13g02571 306 MobiDBLite consensus disorder prediction 1 27 - -
Gma13g02571 306 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 3 303 IPR044823 -
Gma13g02571 306 SMART 118neu2 37 128 IPR006578 -
Gma13g02571 306 Pfam Myb/SANT-like DNA-binding domain 27 120 IPR044822 -
Gma13g02571 306 Gene3D - 30 97 - -
Gma13g02571 306 MobiDBLite consensus disorder prediction 203 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02571 Gma-Chr13 40560693 40565056 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02571 222 293 Trihelix Transcription Factor Family AT3G14180 45.205 5.47e-14 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gma13g02571 Myb_DNA-bind_4 6.3e-26 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02571 - - gmx:100811154 570.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02571 13 40560693 40565056 Gma13g02571 13 40560693 40565056 ECH
Gma13g02571 13 40560693 40565056 Gma12g01988 12 40463576 40468472 GST