Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02570 ATGGAGGAGACACGAGAAGATGCAGGGCCGGCAGAGCAAGGGCCATCTAATGTGTTGTGGTGGCCTTCAGATTTTGTTGAAAAATTTGGATCTGTTTCTTTGGGTTCTCAAGATGAGACCTTAAGTAATAAGGAATCTCCTCGACATGTTGTCGAAGATGTGCTGTCTTCTCTGAAAGCATCACAAACACTCTGGCAGACTGGAATGCTTTCAGAACCAATACCAAATGGTTTTTACTCAGTCATTCCGGAGACAAGACTCAAAGAACTTTTTTATAGTATTCCTACCTTGGACGAACTTCATGCTCTGGGTGGAGAGGGTTTTAAGGCTGATATCATTCTTGTGGATTCAGAGAAAGATAAAAAGCTATCCATGTTAAAGCAATTAATTATGGCATTAGTTAGAGGATTAAACGCAAATCCAGCTGCCATAATTAAGAAGATAGCTGGATTAGTTTCTGATTTTTATAAGCGTCCCAATGTGGAAAGTCCTGCAAAAGCTGCACTAGATGAAACCTCTCACATGTTTGAGAATCGAGGAGTCCAGATGCTGGGGCAAATAAAGCATGGTTCTTGCCGTCCTCGAGCTATCTTATTTAAAGTATTAGCTGATACTGTTGGTCTTGAAAGTAGGCTCATGGTGGGCTTGCCAAATGATGGAGCTATTGAATGTCAAGATTCATACAAGCATATGTCTGTGATAGTCGTATTAAATTCTCTGGAAATGCTGGTTGATCTTATGCGATTTCCAGGCCAATTGTTACCACGATCAACCAAGTCAGTTTTTATGACTCACATTTCTGCAGGAGAGAGTGATTCAGCAGAAAATGATTCTTGTGATTCACCATTAGAACCAAACAGCCCTTTATTTGGGGTTTCAGAGAGTGCTGAGAAGGAGGAAAACCTCCAATTCCATAGAAGATTTGAAGCATCTTCGAATGTATCAGGCCTTTCCTTGAGAAACGTGATGTTACGATCAAATAGCAATTTAAGTTTGTCACATAGTGAACCCAACATTGCTACTGCATTTGGTCGGCGTAGTCGGAGAAAGGTCATTGCTGAACAGAGGACAGCTAGTTCAAGTCCAGAACATCCATCATTTCGAGCACGTGGAAGGTCCATGCTTAGTGGTGATAGGACAACGTTTAGAGATTTTACCGATGATCAGGCTACATCAAGATCCAGCTATAGGTCAGATGGCACATCCTCGTCAGAAGCTCGTCGGATACGAAGAAGAAGCATCAGCATTACACCAGAGATTGGAGATGATATCGTAAGGGCTGTACGGGCAATGAATGAAACTCTGAAGCAAAACCGTCTCTTGAGAGAACGAGGGGATGATAACTCATTCCCCAATTCTCCAAACAATAGTAGTAGTGATGCAAATCTTCAGAAAAATCGTGACCAAGGAACTTCACAAAAGGCAATGTCATTACCATCTTCACCACATGATTATAGAGGCCAGGCTTCTGAGAGAAGTGGGCCATCAAGATACGGAGTGAATGATGAAATGGAGTCAACATGGAATAAAGTACTGGAATCTCCAATGTTCAATAATAAACCTCTGTTACCATATGAAAAATGGAACATTGACTTCTCAGAATTGACTGTTGGAACTCGCGTAGGGATAGGTTTCTTTGGAGAAGTTTTCCGTGGCATATGGAATGGCACAGATGTTGCAATCAAGGTTTTTCTAGAGCAAGATTTAACTGCTGAAAATATGGAAGACTTTTGCAACGAGATATCTATTCTGAGCCGGCTCCGACATCCTAATGTTATCTTGTTTCTTGGTGCATGCACAAAGCCTCCACGCTTGTCAATGGTTACAGAATATATGGAGTTGGGATCATTGTATTACTTGATGCATTTGAGCGGTCAAAAGAAAAAGCTTAATTGGCGGAGAAGACTACGGATGCTGCGTGACATATGCAAGGGTTTGATGTGCATACACCGAATGAAGGTTGTTCACCGTGATCTGAAAAGTGCAAATTGTCTAGTGAATAAGCATTGGACCGTCAAAATATGTGATTTTGGGCTTTCAAGAATAATGACAGAATCTCCAATGAGAGATTCTTCCTCAGCTGGAACTCCAGAATGGATGGCTCCTGAGCTTATTCGAAATGAACCATTCACAGAAAAATGTGATATCTTTAGCCTTGGGGTGATAATGTGGGAACTCTGCACCTTGAACAGACCATGGGAAGGAGTACCACCTGAGAGGGTGGTTTATTCCGTTGCGCATGAGGGTTCCAGATTGGAGATACCAGAAGGCCCTCTAGGCAGGCTGATTTCAGAGTGTTGGGCAGAATGTCATCAACGGCCAAGCTGTGAGGAGATTCTTTCTCGTTTGGTGGACATCGAGTACTCCTTGTGCTGA 2376 0.4234 MEETREDAGPAEQGPSNVLWWPSDFVEKFGSVSLGSQDETLSNKESPRHVVEDVLSSLKASQTLWQTGMLSEPIPNGFYSVIPETRLKELFYSIPTLDELHALGGEGFKADIILVDSEKDKKLSMLKQLIMALVRGLNANPAAIIKKIAGLVSDFYKRPNVESPAKAALDETSHMFENRGVQMLGQIKHGSCRPRAILFKVLADTVGLESRLMVGLPNDGAIECQDSYKHMSVIVVLNSLEMLVDLMRFPGQLLPRSTKSVFMTHISAGESDSAENDSCDSPLEPNSPLFGVSESAEKEENLQFHRRFEASSNVSGLSLRNVMLRSNSNLSLSHSEPNIATAFGRRSRRKVIAEQRTASSSPEHPSFRARGRSMLSGDRTTFRDFTDDQATSRSSYRSDGTSSSEARRIRRRSISITPEIGDDIVRAVRAMNETLKQNRLLRERGDDNSFPNSPNNSSSDANLQKNRDQGTSQKAMSLPSSPHDYRGQASERSGPSRYGVNDEMESTWNKVLESPMFNNKPLLPYEKWNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMVTEYMELGSLYYLMHLSGQKKKLNWRRRLRMLRDICKGLMCIHRMKVVHRDLKSANCLVNKHWTVKICDFGLSRIMTESPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLNRPWEGVPPERVVYSVAHEGSRLEIPEGPLGRLISECWAECHQRPSCEEILSRLVDIEYSLC 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02570 791 Pfam Ethylene-responsive protein kinase Le-CTR1 59 253 - -
Gma13g02570 791 Pfam Protein tyrosine and serine/threonine kinase 536 783 IPR001245 GO:0004672|GO:0006468
Gma13g02570 791 CDD STKc_MAP3K-like 541 783 - -
Gma13g02570 791 MobiDBLite consensus disorder prediction 347 410 - -
Gma13g02570 791 MobiDBLite consensus disorder prediction 448 487 - -
Gma13g02570 791 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 27 789 - -
Gma13g02570 791 MobiDBLite consensus disorder prediction 438 501 - -
Gma13g02570 791 MobiDBLite consensus disorder prediction 387 402 - -
Gma13g02570 791 ProSitePatterns Serine/Threonine protein kinases active-site signature. 654 666 IPR008271 GO:0004672|GO:0006468
Gma13g02570 791 Gene3D Transferase(Phosphotransferase) domain 1 614 789 - -
Gma13g02570 791 ProSiteProfiles Protein kinase domain profile. 535 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02570 791 SUPERFAMILY Protein kinase-like (PK-like) 509 783 IPR011009 -
Gma13g02570 791 ProSitePatterns Protein kinases ATP-binding region signature. 541 562 IPR017441 GO:0005524
Gma13g02570 791 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 27 789 - -
Gma13g02570 791 Gene3D Phosphorylase Kinase; domain 1 528 613 - -
Gma13g02570 791 SMART serkin_6 535 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02570 Gma-Chr13 40544493 40556828 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02570 1 791 MAP Kinase Kinase Kinase AT3G58640 71.255 0.0 1180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Gma13g02570 PK_Tyr_Ser-Thr 5.1e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02570 - - gmx:100803469 1451.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02570 13 40544493 40556828 Gma13g02570 13 40544493 40556828 ECH
Gma13g02570 13 40544493 40556828 Gma12g01989 12 40479929 40492980 GST