Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02567 ATGGATGAGACAATTTGCGTATCTGAAGAAGATCATCATAAGAGTGGAAGTAGTAGCAAACCCTCTTCTCCAACTCTTAGAAGAAAACGTTCATTTTTCGATTTGAATGAAGAAGCTGTGGATGGTGGTGGAGATGATAGCACCAGTGATGATGATGGCCTCATGACTAGCAATGGCATTTCATCACAAGAAGGTAATTTGAGTAGCAACAATAGCTCTAGTGAAGAAGGGAAAGAGCGTGCATCTACTGTTAGACAATATGTGCGGTCCAAAATGCCAAGGCTTCGTTGGACTCCTGACCTCCATTTAGCTTTTGTGCATGCTGTTGAGAGGCTTGGTGGACAAGAAAGAGCAACGCCTAAGTTGGTTCTCCAGTTGATGAATGTGAAAGGACTCAGCATTGCACATGTAAAGAGCCATTTGCAGATGTATCGAAGTAAAAAGCTTGATGAGTCCGGCCAAGTTTTACCCCACAATAGGGCAATGCAAGGAAGGCATAGTATTTTTGATATGTACGGAAGACTTAATGCCCCACGACACTTTGGGAATGATAATAGAAACTATTTGCCATCATCTCTACTGTTGGAACAAAGACCTTATGAAAGTGGTCATGGTTCTTCAAGATTACACCCAACAGCACTCTTCAATAGTCACATGATAATAAGATCAAGTTCAGGGTGGGACAAAGATTTATATAATTATCAGTATCAACGTAGTTTCTGCAGTCCTAACTTCACTGGCCACGCCAAGTTTGATGCTGAGGCTCATGATGTGAAAAATCGGATGCCAGAATTCATAAATCAGGTTCAAATATGGAAACAAGGTGACATCAAAGACCAATTAGAGAGGTTGAATGAGAAGAAAGGGTCTCCAAGTTTCTTGGAACTAAAACTAAGTCAAGAATATTCAAGAAATGTTAGAGATCACCAGATGAACAAAGATTCAGAAAGTGAACAAGAAACTAATATGAGACTCTCTCTTTCGTTGTTCACTTCGTCCTCATCCTCAAATTCATCACAACTAGCGCAAGCTTCAAACCCTAAAGAGCCACCTCAAGCCCTCACTTCAGGTTTGCAGGGAGCCCTAGTTACTTATTAA 1098 0.4089 MDETICVSEEDHHKSGSSSKPSSPTLRRKRSFFDLNEEAVDGGGDDSTSDDDGLMTSNGISSQEGNLSSNNSSSEEGKERASTVRQYVRSKMPRLRWTPDLHLAFVHAVERLGGQERATPKLVLQLMNVKGLSIAHVKSHLQMYRSKKLDESGQVLPHNRAMQGRHSIFDMYGRLNAPRHFGNDNRNYLPSSLLLEQRPYESGHGSSRLHPTALFNSHMIIRSSSGWDKDLYNYQYQRSFCSPNFTGHAKFDAEAHDVKNRMPEFINQVQIWKQGDIKDQLERLNEKKGSPSFLELKLSQEYSRNVRDHQMNKDSESEQETNMRLSLSLFTSSSSSNSSQLAQASNPKEPPQALTSGLQGALVTY 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02567 365 Gene3D - 92 149 - -
Gma13g02567 365 MobiDBLite consensus disorder prediction 50 77 - -
Gma13g02567 365 SUPERFAMILY Homeodomain-like 91 147 IPR009057 -
Gma13g02567 365 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 89 149 IPR017930 -
Gma13g02567 365 MobiDBLite consensus disorder prediction 304 323 - -
Gma13g02567 365 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 44 344 IPR044848 GO:0003700
Gma13g02567 365 MobiDBLite consensus disorder prediction 333 365 - -
Gma13g02567 365 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 93 148 IPR006447 GO:0003677
Gma13g02567 365 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 44 344 - -
Gma13g02567 365 MobiDBLite consensus disorder prediction 1 85 - -
Gma13g02567 365 MobiDBLite consensus disorder prediction 1 17 - -
Gma13g02567 365 MobiDBLite consensus disorder prediction 304 320 - -
Gma13g02567 365 Pfam Myb-like DNA-binding domain 95 145 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02567 Gma-Chr13 40522232 40524918 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02567 84 215 G2-like Transcription Factor Family AT2G42660 53.623 5.11e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gma13g02567 Myb_DNA-binding 5.8e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02567 - - gmx:100789731 619.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02567 13 40522232 40524918 Gma13g02567 13 40522232 40524918 ECH
Gma13g02567 13 40522232 40524918 Gma12g01994 12 40515008 40520646 GST