Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02565 ATGGAAGAAGATTACGGCTACAGAAGGACGGCGAAGATAGCACTTGTCGCAATCATGGTGCTCGCTTCCGTCGCCGTCTTTGCATTGCTCGTTGTCTTCGCTTACTACTGCTACATCCTCAACAAGGTCTCGAATCGTCGCAAAAGCCTCAAAAAAGTTGAAGATGCCAACCTTAACGAGAAAAGTGACTTTGCAAATCTGCAAGTTGTTGCTGAGAAAGGACTTCAGGTGTTTACTTTCAAGCAGCTGCATTCTGCAACGGGGGGATTCAGCAAGTCAAATGTCATTGGTCATGGTGGATTTGGACTTGTTTACCGGGGAGTGCTCAATGATGGTAGGAAAGTTGCAATTAAATTCATGGATCAGGCAGGAAAGCAAGGAGAAGAAGAATTTAAAGTAGAGGTGGAATTGCTAACTCGGTTGCATTCTCCATATCTGCTGGCATTGCTTGGATACTGCTCTGATAGTAATCATAAATTACTGGTGTATGAATTTATGGCAAATGGTGGACTGCAGGAACATCTTTATCCTGTCAGCAATTCTATTATTACGCCTGTGAAGTTGGATTGGGAAACACGATTAAGAATAGCACTTGAAGCTGCTAAGGGTTTGGAATATCTTCATGAGCATGTCAGCCCTCCAGTGATTCACAGAGATTTTAAGAGCAGCAACATCCTCTTGGGCAAGAAATTTCATGCCAAAGTTTCTGATTTTGGATTGGCGAAGCTTGGACCTGATAGAGCTGGTGGACATGTTTCAACTCGGGTTTTGGGCACCCAGGGATATGTTGCCCCCGAatatgcactaacagggcatttaacaacaaaatcagatgtgtacagttatggtgttgtacttttggagCTGCTCACTGGCCGGGTGCCTGTTGATATGAAGAGACCTCCAGGGGAAGGTGTTCTTGTTTCTTGGGCTCTGCCCCTTTTGACTGATAGAGAAAAGGTTGTAAAGATTATGGATCCTTCATTGGAGGGACAATACTCTATGAAAGAGGTTGTCCAGGTGGCTGCAATTGCTGCAATGTGTGTGCAACCAGAGGCAGATTATCGGCCTCTAATGGCAGATGTTGTGCAGTCATTGGTTCCACTGGTGAAGACTCAAAGGTCCCCCTCAAAGGTAGGCAGCTGCTCTAGTTTCAATTCCCCTAAGTTGTCCCCTGGCCCAACATTTTAA 1191 0.4299 MEEDYGYRRTAKIALVAIMVLASVAVFALLVVFAYYCYILNKVSNRRKSLKKVEDANLNEKSDFANLQVVAEKGLQVFTFKQLHSATGGFSKSNVIGHGGFGLVYRGVLNDGRKVAIKFMDQAGKQGEEEFKVEVELLTRLHSPYLLALLGYCSDSNHKLLVYEFMANGGLQEHLYPVSNSIITPVKLDWETRLRIALEAAKGLEYLHEHVSPPVIHRDFKSSNILLGKKFHAKVSDFGLAKLGPDRAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPVDMKRPPGEGVLVSWALPLLTDREKVVKIMDPSLEGQYSMKEVVQVAAIAAMCVQPEADYRPLMADVVQSLVPLVKTQRSPSKVGSCSSFNSPKLSPGPTF 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02565 396 Gene3D Transferase(Phosphotransferase) domain 1 166 383 - -
Gma13g02565 396 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Gma13g02565 396 PANTHER OS01G0750732 PROTEIN 4 388 - -
Gma13g02565 396 ProSiteProfiles Protein kinase domain profile. 90 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02565 396 MobiDBLite consensus disorder prediction 375 396 - -
Gma13g02565 396 Gene3D Phosphorylase Kinase; domain 1 50 165 - -
Gma13g02565 396 PANTHER OS07G0227300 PROTEIN 4 388 - -
Gma13g02565 396 SUPERFAMILY Protein kinase-like (PK-like) 72 366 IPR011009 -
Gma13g02565 396 Pfam Protein tyrosine and serine/threonine kinase 93 366 IPR001245 GO:0004672|GO:0006468
Gma13g02565 396 CDD STKc_IRAK 96 369 - -
Gma13g02565 396 ProSitePatterns Protein kinases ATP-binding region signature. 96 118 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02565 Gma-Chr13 40494784 40499267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02565 1 392 Receptor kinase-like Gene Family AT3G58690 77.041 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Gma13g02565 PK_Tyr_Ser-Thr 1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02565 - - gsj:114372917 762.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02565 13 40494784 40499267 Gma13g02565 13 40494784 40499267 ECH
Gma13g02565 13 40494784 40499267 Gma12g01996 12 40547921 40552700 GST