Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02563 ATGGCCTCTATGCCGTTGCGGCCGCAGCAACTGCTTCAACCGCCGCCGCCGCTAGTGGAGAATGACGCGATGAAAGTGGACTCTCGCGGCGGCTCCGACGCCAGCGCCGAAAAGGAAATGTCAGCTCCTGTCGCAGATGGTAATGATGCGCTCACTGGTCACATAATCTCAACCACAATTGGAGGCAAAAATGGTGAACCTAAACAAACCATCAGTTACATGGCTGAACGTGTTGTTGGCACTGGATCATTCGGAATTGTTTTCCAGGCGAAGTGCTTGGAGACGGGGGAGGCAGTGGCTATAAAAAAGGTCTTGCAGGACAGGCGATACAAAAATCGTGAACTGCAGTTAATGCGCATGATGGATCACCCAAATATAATTACCCTGAGTAACTATTTCTTCTCTACAACAAGTAGAGATGAACTTTTTCTGAATTTGGTGATGGAATATGTCCCTGAGACGATCTTCCGTGTTATAAAGCACTACAGTAGTATGAAACAGAGAATGCCCCTAATCTATGTGAAATTATATACATATCAAATCTTTAGGGGACTGGCGTATATCCACACTGTACCAGGAATTTGCCATAGGGATGTGAAGCCTCAAAATCTTTTAGTTGATCCACTCACACACCAAGTCAAGCTCTGTGATTTTGGGAGTGCAAAAGTTCTGGTGGAGGGTGAATCAAACATTTCATACATATGCTCACGGTACTATCGTGCCCCAGAACTAATATTTGGTGCAACAGAATACACAACTTCTGTTGATATTTGGTCAGCTGGTTGTGTCCTTGCAGAACTTCTTCTAGGCCAGCCTTTGTTCCCAGGAGAAAATCAGGTCGATCAACTCGTGGAAATTATCAAGATTCTTGGCACTCCCACCCGAGAAGAAATTCGATGCATGAATCCTAATTATACAGATTTCAGATTCCCCCATATCAAAGCTCATCCTTGGCATAAGGTTTTTCACAAGCGAATGCCTCCTGAAGCAATTGACCTTGCATCAAGGCTTCTCCAATATTCCCCAAAACTTCGTTACAGTGCAGTGGAAGCAATGGCACATCCTTTCTTTGAGGAGCTTCGCGAGCCCAATGCCCGGCTACCTAATGGTCGTTCACTGCCTCCCCTTTTCAACTTTAAAAAGGAATTAGATGGAGCGCCCCCTGAACTGCTTCCTAAGCTCATCCCAGAGCACGTCAGGCGGCAAACTGGTCTCGGCTTCCTGTACTCGGCAGAAACCCAAACCCAAATGTAA 1254 0.4617 MASMPLRPQQLLQPPPPLVENDAMKVDSRGGSDASAEKEMSAPVADGNDALTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGEAVAIKKVLQDRRYKNRELQLMRMMDHPNIITLSNYFFSTTSRDELFLNLVMEYVPETIFRVIKHYSSMKQRMPLIYVKLYTYQIFRGLAYIHTVPGICHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVEGESNISYICSRYYRAPELIFGATEYTTSVDIWSAGCVLAELLLGQPLFPGENQVDQLVEIIKILGTPTREEIRCMNPNYTDFRFPHIKAHPWHKVFHKRMPPEAIDLASRLLQYSPKLRYSAVEAMAHPFFEELREPNARLPNGRSLPPLFNFKKELDGAPPELLPKLIPEHVRRQTGLGFLYSAETQTQM 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02563 417 Gene3D Transferase(Phosphotransferase) domain 1 153 400 - -
Gma13g02563 417 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 23 406 - -
Gma13g02563 417 CDD STKc_GSK3 68 360 IPR039192 -
Gma13g02563 417 ProSiteProfiles Protein kinase domain profile. 73 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02563 417 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Gma13g02563 417 PANTHER OS02G0236200 PROTEIN 23 406 - -
Gma13g02563 417 MobiDBLite consensus disorder prediction 1 41 - -
Gma13g02563 417 Pfam Protein kinase domain 73 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02563 417 ProSitePatterns Protein kinases ATP-binding region signature. 79 103 IPR017441 GO:0005524
Gma13g02563 417 Gene3D Phosphorylase Kinase; domain 1 58 152 - -
Gma13g02563 417 SMART serkin_6 73 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02563 417 SUPERFAMILY Protein kinase-like (PK-like) 72 379 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02563 Gma-Chr13 40476428 40481246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02563 77 387 MAP Kinase Gene Family AT3G59790 34.663 1.51e-56 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Gma13g02563 Pkinase 5.7e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02563 K14502 - gmx:100788319 842.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02563 13 40476428 40481246 Gma13g02563 13 40476428 40481246 ECH
Gma13g02563 13 40476428 40481246 Gma12g01998 12 40569693 40574488 GST