Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02559 ATGCATCACCGTAGATTCAGCAAATTAATACATGTGGCTGACCCAGATGAGCCTGAGTCCGGGCCCGAGCCCGCCTCAGAAGCTGGGCCTGCTTCTCCTTCTTCCGGTGAAGACACAAAAACTGAAGCACCGTCACCCAAGAAAAGGAGGGAGATGAAGAAGAGGGTGGTGACGATACCGATCGGTGACGTGGATGGATCTAAGAGCAAAGGAGAAAATTATCCACCGTCGGATTCATGGGCCTGGAGGAAGTACGGCCAAAAGCCCATCAAAGGCTCCCCTTACCCAAGGGGATATTACCGATGCAGCAGTTCAAAGGGGTGTCCCGCAAGGAAGCAAGTTGAGCGAAGCCGTGTGGACCCCACAAAGCTAATAGTCACCTACGCATATGAACACAACCACTCCCTCCCTCTCCCAAAATCAAATTCCTCCGCGGCTTCCGCCGCTGTAAGCGACGGCGCCACCTCCTCCTCACCGGCAGATTCCGCCGCCAGGTACCCGCCGGAGGAGGAGATGAAGGTGTTCGCGACGGACTCAGACCTCGAACTCGCCGGCGACGCGGCGGTTCTGCTCAGCCACCACCACCACCACCACTTCGGGTGGTTCGATGACGTGACGTCCACCGGCGTCCTCGAAAGCCCGATCTGCGGCGAGGTGGATGACGTGGCGGTGCCGATGAGGGAGGAGGACGAGTCGCTCTTCGCCGATCTCGGCGAGTTGCCGGAGTGCTCGGCGGTTTTCCGGCGGATGAATATTCCGGCGACCAGCGCGATCCGGTGCGGCGGCATCACAGGATAA 798 0.5902 MHHRRFSKLIHVADPDEPESGPEPASEAGPASPSSGEDTKTEAPSPKKRREMKKRVVTIPIGDVDGSKSKGENYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPTKLIVTYAYEHNHSLPLPKSNSSAASAAVSDGATSSSPADSAARYPPEEEMKVFATDSDLELAGDAAVLLSHHHHHHFGWFDDVTSTGVLESPICGEVDDVAVPMREEDESLFADLGELPECSAVFRRMNIPATSAIRCGGITG 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02559 265 SUPERFAMILY WRKY DNA-binding domain 73 137 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma13g02559 265 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 24 254 IPR044810 GO:0003700
Gma13g02559 265 MobiDBLite consensus disorder prediction 136 167 - -
Gma13g02559 265 ProSiteProfiles WRKY domain profile. 77 137 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma13g02559 265 MobiDBLite consensus disorder prediction 136 162 - -
Gma13g02559 265 MobiDBLite consensus disorder prediction 1 91 - -
Gma13g02559 265 SMART WRKY_cls 76 136 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma13g02559 265 Pfam WRKY DNA -binding domain 78 134 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma13g02559 265 Gene3D WRKY domain 64 138 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma13g02559 265 PANTHER OS01G0750100 PROTEIN 24 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02559 Gma-Chr13 40453385 40456315 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02559 3 252 WRKY Transcription Factor Family AT3G58710 49.057 6.21e-71 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma13g02559 WRKY 1.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02559 - - gmx:100127424 470.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02559 13 40453385 40456315 Gma12g02001 12 40605484 40608475 GST