Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma13g02559 | ATGCATCACCGTAGATTCAGCAAATTAATACATGTGGCTGACCCAGATGAGCCTGAGTCCGGGCCCGAGCCCGCCTCAGAAGCTGGGCCTGCTTCTCCTTCTTCCGGTGAAGACACAAAAACTGAAGCACCGTCACCCAAGAAAAGGAGGGAGATGAAGAAGAGGGTGGTGACGATACCGATCGGTGACGTGGATGGATCTAAGAGCAAAGGAGAAAATTATCCACCGTCGGATTCATGGGCCTGGAGGAAGTACGGCCAAAAGCCCATCAAAGGCTCCCCTTACCCAAGGGGATATTACCGATGCAGCAGTTCAAAGGGGTGTCCCGCAAGGAAGCAAGTTGAGCGAAGCCGTGTGGACCCCACAAAGCTAATAGTCACCTACGCATATGAACACAACCACTCCCTCCCTCTCCCAAAATCAAATTCCTCCGCGGCTTCCGCCGCTGTAAGCGACGGCGCCACCTCCTCCTCACCGGCAGATTCCGCCGCCAGGTACCCGCCGGAGGAGGAGATGAAGGTGTTCGCGACGGACTCAGACCTCGAACTCGCCGGCGACGCGGCGGTTCTGCTCAGCCACCACCACCACCACCACTTCGGGTGGTTCGATGACGTGACGTCCACCGGCGTCCTCGAAAGCCCGATCTGCGGCGAGGTGGATGACGTGGCGGTGCCGATGAGGGAGGAGGACGAGTCGCTCTTCGCCGATCTCGGCGAGTTGCCGGAGTGCTCGGCGGTTTTCCGGCGGATGAATATTCCGGCGACCAGCGCGATCCGGTGCGGCGGCATCACAGGATAA | 798 | 0.5902 | MHHRRFSKLIHVADPDEPESGPEPASEAGPASPSSGEDTKTEAPSPKKRREMKKRVVTIPIGDVDGSKSKGENYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPTKLIVTYAYEHNHSLPLPKSNSSAASAAVSDGATSSSPADSAARYPPEEEMKVFATDSDLELAGDAAVLLSHHHHHHFGWFDDVTSTGVLESPICGEVDDVAVPMREEDESLFADLGELPECSAVFRRMNIPATSAIRCGGITG | 265 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma13g02559 | 265 | SUPERFAMILY | WRKY DNA-binding domain | 73 | 137 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Gma13g02559 | 265 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 24 | 254 | IPR044810 | GO:0003700 | |
Gma13g02559 | 265 | MobiDBLite | consensus disorder prediction | 136 | 167 | - | - | |
Gma13g02559 | 265 | ProSiteProfiles | WRKY domain profile. | 77 | 137 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gma13g02559 | 265 | MobiDBLite | consensus disorder prediction | 136 | 162 | - | - | |
Gma13g02559 | 265 | MobiDBLite | consensus disorder prediction | 1 | 91 | - | - | |
Gma13g02559 | 265 | SMART | WRKY_cls | 76 | 136 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gma13g02559 | 265 | Pfam | WRKY DNA -binding domain | 78 | 134 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gma13g02559 | 265 | Gene3D | WRKY domain | 64 | 138 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Gma13g02559 | 265 | PANTHER | OS01G0750100 PROTEIN | 24 | 254 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma13g02559 | Gma-Chr13 | 40453385 | 40456315 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma13g02559 | 3 | 252 | WRKY Transcription Factor Family | AT3G58710 | 49.057 | 6.21e-71 | 217 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Gma13g02559 | WRKY | 1.7e-24 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma13g02559 | - | - | gmx:100127424 | 470.314 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma13g02559 | 13 | 40453385 | 40456315 | Gma12g02001 | 12 | 40605484 | 40608475 | GST |