Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02550 ATGCCAGTTGCAACACTGATGGATAGTAAAAAATTCTCTGGTGGCCACACAGTCATCAAGCTCAACCAATCAGGGCCTCACAACTTCATCAGTGGAAACAAAAACAGCTGTCTCAAAAACGAGAAGCTTGTGGTGATTGTGCTGGCAGACAGGAACAACAAAAACACAAACCAAACAAGCCCTCCCTCTCCTTCGTCTCCTGCTCCTTCTCCTTCCCTTTTGACACAGTCATTAGCTCCATTACCAGCACCTTCTCAGCAACAGGTTCCACCTCCACCATCTCCAGTGGCAGCACCTCCTCAGCAAGAGGCTCCTTCTCCAGCAACAAGTAACCCCACTCCAGCTCCTGTTAGTGATCAACCTTCTCCTCCTCATAATGATGCTTCTTCAATCTTGTTCAACTTTGCTGGTTCTGTTGGAGCATTCATTGCTTCAGTTCTGGTTTTTTCTTTGAGTGGAGTGTATGATATATGA 474 0.4641 MPVATLMDSKKFSGGHTVIKLNQSGPHNFISGNKNSCLKNEKLVVIVLADRNNKNTNQTSPPSPSSPAPSPSLLTQSLAPLPAPSQQQVPPPPSPVAAPPQQEAPSPATSNPTPAPVSDQPSPPHNDASSILFNFAGSVGAFIASVLVFSLSGVYDI 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02550 157 MobiDBLite consensus disorder prediction 84 121 - -
Gma13g02550 157 Gene3D - 3 60 IPR008972 -
Gma13g02550 157 PANTHER BLUE COPPER PROTEIN 10 151 IPR039391 GO:0009055
Gma13g02550 157 MobiDBLite consensus disorder prediction 51 126 - -
Gma13g02550 157 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 10 151 - -
Gma13g02550 157 SUPERFAMILY Cupredoxins 11 49 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02550 Gma-Chr13 40392451 40394001 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02550 11 56 Phytocyanin Superfamily AT3G20570 68.085 8.78e-16 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02550 - - gmx:100788637 152.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02550 13 40392451 40394001 Gma12g02009 12 40690436 40692154 GST
Gma12g01216 12 15848859 15850782 Gma13g02550 13 40392451 40394001 PCT