Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02548 ATGAAAACTGCTTTATTAAAGCAGGTAACTTCTTCGTACTCAACAAAAATAATAACAGCTTGTTTGtTTCTCTTCTTGAACTGCCATGTTGGCTACGGCCAAAATGACTTTGAAAAATTTTCGTCCTTGTCGTCGCCGCCACCGCCTCTAATGACGGAGCTCGACGCCTGCAACGGTGTGTTTCTCACGTACGCGCTCCTTGGGCGCGTGAAGGAGTACCCGCACGTGAAGAACACGTCGAAGCAGGCGTGGGCGTTCAAGGCGGAGGCGTCCCTGACAAACGTCGGGGACGAGGAGGTGCAGGGGTGGAAGATGTACGTGGGGTTCCAGCACCGCGAGATTCTGGTCTCCGCCGACGGCGCCGTGCTCACCGACGCCGGGGACTTTCCGGCGGAGGTGGGGAACGGGACCACGATGATGGGGTCCACCGCGACGGACTTGAAGACCGCCATAGATACCGCCGGGGATATTGACCAGATGAGTGTGAGGATTCAGATGAAGGGGACGCAGTTTGGGTTGGGTGCTGGGGCTACGCCAATGCCTAAAACTATTCATCTTGAGAATGATGGCTTCAAATGCCCTGCACCCAGTCGAAGAGCCACGAGAATGTTCGTATGCTGCAGAAAGGACCCAAAAGTAAAAGCCAAGCAAGCTAAGAAAACAAAGTACCCACCTCGTCGCAAAGGAGACATAACCATAGCATACGACGTGCTCCAAGCCTTCCAGAACAACTACTACGCGCAAGTCACAATAGACAACAACCACCCATTAGGTCGTCTCGATCACTGGAACCTAACATGGGAATGGCAAAAGGGAGAATTCATATACTCCATGAAAGGAGCCTTTGCTCGCAGAAGAGACCCTTCTGAGTGCTTGTACGGCCTCGCAGGAAAATTCTACAAAGACATGGATTTCACAAACGTCGCAACCTGTCAAAAGAAGCCAACAATCTCTGATCTTCCATCAGAGAGAAAAGAAGATGAGAAAGTTGGAAAACTTCCTTGGTGTTGTAGGAATGGCACTGTTTTGCCTCCTATCATGGACAAGAACAAAGCTAGGTCAATGTTCCAGATGCAAGTGTTCAAAATTGCACCTGACACTGATAACAGAACTGCTCTCACTCCACCTTCAAAGTGGAACATTGATGGTGTCATTAACCCTAAATACAAGTGCAGTGCCCCAGTTAGGGTTGACCCACAAGTCTTCCCTGACCCTAGTGGGCTTAGTGCTATTAGCACAGCGGTTGCAAGTTGGCAAATAGTTTGCAACATCACAAAACCTAAGCCTCAAGAAAACCGTTGTTGTGTCTCTTTCTCAGCATTCTACAACGAATCAGCCATCCCTTGCAACACGTGTGCATGTGGGTGTGATGACACGAGGAAGTGCAGCTCTAGGGCTTCTCCGATGCTTCTTCCACCAGATGTTCTTCTTGTGCCGTTTGCTAACAGGTCCGTTAAGGCACGTGCATGGGCCAGGCTCAAGCACTTGCACGTACCGAGCAAGCTCCCTTGTGGGGACAATTGCCCCGTCAGCATAAACTGGCACGTGAGTTCTGATCACAGGGATGGATGGACAGCTAGGATCACACTTTTCAACTGGGAGGACTATTCCTTTGACGATTGGTTCACTGCAGTTCAGTTGAGGAGAACTTTCGAGGATTTTGAAGATGTGTATTCCTTCAATGGGACGAGGATTCCTGGTCTCAAAACTGTGTTCTTTGAAGGGTTAAAGGGTTTGAATTACTTGGCTGGAGAAACCAATGGAACACACGCTAATGACCCCAGGGTTCCAGGGAAACAACAATCTGTTATTTCTTTCAGCAAGAAGCATATAAAAGACTTCGATGTCACACATGATGGGTTCCCCACTAAGGTTTTCTTCAATGGAATGGAGTGTTCACTTCCTCCAATTAGACCTGCCAAAAGTTCAGGGCGCAAATCATCTTCCATCAGTGTCATTGCACTCGTTTTCACAGCTTTTGTGACTTTCTTGATGATCTAA 2001 0.4878 MKTALLKQVTSSYSTKIITACLFLFLNCHVGYGQNDFEKFSSLSSPPPPLMTELDACNGVFLTYALLGRVKEYPHVKNTSKQAWAFKAEASLTNVGDEEVQGWKMYVGFQHREILVSADGAVLTDAGDFPAEVGNGTTMMGSTATDLKTAIDTAGDIDQMSVRIQMKGTQFGLGAGATPMPKTIHLENDGFKCPAPSRRATRMFVCCRKDPKVKAKQAKKTKYPPRRKGDITIAYDVLQAFQNNYYAQVTIDNNHPLGRLDHWNLTWEWQKGEFIYSMKGAFARRRDPSECLYGLAGKFYKDMDFTNVATCQKKPTISDLPSERKEDEKVGKLPWCCRNGTVLPPIMDKNKARSMFQMQVFKIAPDTDNRTALTPPSKWNIDGVINPKYKCSAPVRVDPQVFPDPSGLSAISTAVASWQIVCNITKPKPQENRCCVSFSAFYNESAIPCNTCACGCDDTRKCSSRASPMLLPPDVLLVPFANRSVKARAWARLKHLHVPSKLPCGDNCPVSINWHVSSDHRDGWTARITLFNWEDYSFDDWFTAVQLRRTFEDFEDVYSFNGTRIPGLKTVFFEGLKGLNYLAGETNGTHANDPRVPGKQQSVISFSKKHIKDFDVTHDGFPTKVFFNGMECSLPPIRPAKSSGRKSSSISVIALVFTAFVTFLMI 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02548 666 PANTHER COBRA-LIKE PROTEIN 7 10 666 - -
Gma13g02548 666 PANTHER COBRA-LIKE PROTEIN 10 10 666 - -
Gma13g02548 666 Pfam COBRA-like protein 245 425 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02548 Gma-Chr13 40376552 40379218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02548 47 666 COBRA Gene Family AT3G20580 58.880 0.0 779
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02548 - - gmx:100789175 1263.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02011 12 40707930 40710723 Gma13g02548 13 40376552 40379218 ECH
Gma13g02548 13 40376552 40379218 Gma13g02548 13 40376552 40379218 ECH
Gma13g02548 13 40376552 40379218 Gma12g02011 12 40707930 40710723 GST