Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02511 ATGGCAGATAATGATCAATTTCAAGCAAGTGGGAACTGGTGGGAAACAGCAAGAAGCGTGAGGTATGAGAGCGGAGCATCACAGTCATCTTCCTCAGCCATCACCAACATAGGCAACAACTTTGGTTGGCAACAAGGTTCTGATATGGCAGACATGAAGCCAAGGTCTTCCATGGATTCTTCTTCTGTGGTTTTCCATGACACACAGAATAATAAGCTTCAGCAACCAGATTCTGCCACTTCAACTGACCCCAACTTGCATATGATGGGGCTAGGCCTTTCTTCCCAGACCATGGATTGGAATCAAGCATCTTTGTTAAGAGGAGAGAAGGGTACGGAGAACAGTTTCCGGTCGATGCTGCAAGAGAATTTGAGCTCATCAAGGACCAATTTTCAGCAAGAAACTGGGAATATGGGGTTGTCTCAACAAGTTCAATGGAGGTCAGAGAAGATGTTCTCTTCAGAGTCTTCAACCAATGAGTTCAAGCAAGTGAATAATAGGGGTGGTGGTGGCTTCTCTTTGGATCAAAGCCAGTTTAGTCCTCAATATAGCTCTGGGGACAGCACAGTGACAAGCCAAGGGTTACCCTCTTCTAACTTTCAGATTGATTCTTCAGCCTTATATGGGACCCCTTCAATCTTGCAAGGACTATTGGGACCTGATCACAATAACCAACCCCAACAACAACAACCTATGAGTTTTCCATACCAAACAACAAGCTATGGGTTGAACTCTAATGAGTTGGTTCCTTCTTGGTCCAAAGTTCCTCAATTCTTGAGAGCTTCACCTCCAAAACAACCACCCAATAACCAGTTGCATTTCACTAACAACGCAACCTTTTGGAATGATTCTGAGGCTGCAAACAACAAAGATGTTCGCCCCAGCTTCTTCCCCTCATTGCAACCCCCTTTCTCTACGCCAAATTTTGAAGTACAGTCAAAGAATATATCAGAAGTTAGGGAGTCAGGTACCGTGGTAAAGAAAAGTGGGAATGAGCCAGCACCCAAAAGAACCCGTAACGAATCACCATCTCCTTTGCCAGCTTTTAAGGTGAGAAAAGAGAAGATGGGGGACAGAATCACTGCACTCCAACAATTGGTGTCGCCTTTCGGAAAGACTGATACAGCCTCAGTGCTCTCTGAAGCCATTGAATACATCAAATTCCTCCACGAACAGGTCACTGCTTTAAGTACCCCGTATATGAAAAGTGGAGCTCCAATGCAGATTCAACAGAATTCTGGCAAATCTAAGGAAGCTGAGGGTCCAAAGCAGGATCTAAGAAGCCGAGGGCTATGCTTGGTGCCTGTTTCGAGTACATTTCCCGTGACTCATGAAACCACAGTTGATTTTTGGACACCAACATTCGGAGGAACTTCTAGATAA 1383 0.449 MADNDQFQASGNWWETARSVRYESGASQSSSSAITNIGNNFGWQQGSDMADMKPRSSMDSSSVVFHDTQNNKLQQPDSATSTDPNLHMMGLGLSSQTMDWNQASLLRGEKGTENSFRSMLQENLSSSRTNFQQETGNMGLSQQVQWRSEKMFSSESSTNEFKQVNNRGGGGFSLDQSQFSPQYSSGDSTVTSQGLPSSNFQIDSSALYGTPSILQGLLGPDHNNQPQQQQPMSFPYQTTSYGLNSNELVPSWSKVPQFLRASPPKQPPNNQLHFTNNATFWNDSEAANNKDVRPSFFPSLQPPFSTPNFEVQSKNISEVRESGTVVKKSGNEPAPKRTRNESPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTALSTPYMKSGAPMQIQQNSGKSKEAEGPKQDLRSRGLCLVPVSSTFPVTHETTVDFWTPTFGGTSR 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02511 460 SMART finulus 351 395 IPR011598 GO:0046983
Gma13g02511 460 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 340 389 IPR011598 GO:0046983
Gma13g02511 460 CDD bHLH_AtbHLH_like 346 397 IPR045239 -
Gma13g02511 460 MobiDBLite consensus disorder prediction 404 426 - -
Gma13g02511 460 PANTHER TRANSCRIPTION FACTOR BHLH123-LIKE ISOFORM X1 9 449 - -
Gma13g02511 460 MobiDBLite consensus disorder prediction 152 194 - -
Gma13g02511 460 MobiDBLite consensus disorder prediction 321 347 - -
Gma13g02511 460 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 9 449 - -
Gma13g02511 460 Gene3D - 350 412 IPR036638 GO:0046983
Gma13g02511 460 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 350 406 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02511 Gma-Chr13 40018471 40022895 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02511 107 460 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 46.970 6.46e-83 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02511 - - gmx:100778697 891.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02511 13 40018471 40022895 Gma13g02511 13 40018471 40022895 ECH
Gma13g02511 13 40018471 40022895 Gma12g02044 12 41103610 41106983 GST