Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02505 ggtacattgacaaatgaccaagatatagctgtgaagcggctttgcaataattcaggacagggaccaaaagagttcataaatgaagttgtgctaattgccaatcttcagcaccgaaatcttgtgaagcttctagggtgttgcattcaagatgatgagagaatcttgatatatgaattgatgacaaacagaagtttggactactttatttttgttgaagctagaaaaagtttgctgaattgggctcagtgcttccaaattatttgtgggattgctcgaggacttctctatcttcatgaagattctagattaaggattatccacagagatctcaaaacaagcaatattcttctagatgaaagcatgaatccaaaaatatcagactttggtcttgctagaacatttggaggagatgaagttgaaggccaaacaaagagagtagtgggaacttatggttatatttctccagagtacgctgctcgtgggaatttctctgtgaagtctgatgtcttcagttttggtgttattgtactagagacagtttgtggaaagaagaatagggaGCATGGAGACTGGTGTGAAGAAGGACCAATGGAGTTGCTAGATGAATCACTAAGCAAATCAATAGATCTGGCTGAAGCTGATGTATTAAGATGTATTCAGATCGGTCTTTTATGTGTACAAGACAGACCAGAGGATAGGCCAGACATGTCAGTTGTAGTTATAATGCTGAATGGTGAGAAATTATTGCCTAGGCCAAGGGAACCGGCCTTTTATCCGCATCAATCTGGTTCTTCATCAGGAAATAGTAAACTGAAATCAACCAATGAGATTTCTCTGTCATTGTTAGATGCAAGATAG 858 0.141 GTLTNDQDIAVKRLCNNSGQGPKEFINEVVLIANLQHRNLVKLLGCCIQDDERILIYELMTNRSLDYFIFVEARKSLLNWAQCFQIICGIARGLLYLHEDSRLRIIHRDLKTSNILLDESMNPKISDFGLARTFGGDEVEGQTKRVVGTYGYISPEYAARGNFSVKSDVFSFGVIVLETVCGKKNREHGDWCEEGPMELLDESLSKSIDLAEADVLRCIQIGLLCVQDRPEDRPDMSVVVIMLNGEKLLPRPREPAFYPHQSGSSSGNSKLKSTNEISLSLLDAR 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02505 285 MobiDBLite consensus disorder prediction 252 272 - -
Gma13g02505 285 SMART serkin_6 1 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02505 285 Gene3D Transferase(Phosphotransferase) domain 1 60 249 - -
Gma13g02505 285 PIRSF ILK 4 249 - -
Gma13g02505 285 SUPERFAMILY Protein kinase-like (PK-like) 4 262 IPR011009 -
Gma13g02505 285 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 1 285 - -
Gma13g02505 285 Pfam Protein tyrosine and serine/threonine kinase 5 240 IPR001245 GO:0004672|GO:0006468
Gma13g02505 285 Gene3D Phosphorylase Kinase; domain 1 1 59 - -
Gma13g02505 285 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 285 - -
Gma13g02505 285 ProSiteProfiles Protein kinase domain profile. 1 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02505 285 ProSitePatterns Serine/Threonine protein kinases active-site signature. 105 117 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02505 Gma-Chr13 39956800 39958024 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02505 1 273 Receptor kinase-like Gene Family AT4G11480 52.189 1.18e-100 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma13g02505 PK_Tyr_Ser-Thr 1.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02505 - - ccaj:109805721 480.715