Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02504 ATGGATAGCTATGAGGTGATGATAGTGTGGTTCTCTCTCTTATTCTCCCTCATCCCCAGCATCAGTACTAGACTGAGTAGTATCACTCTAGATCAACCCTTACACCACAATGAAaccctggtttcagcatctggaacctttgaagcagggttcttcagcactggaagttctcagagacaatacttttgcatatgttacaagaatatatcacctagaacaattgtgtgggtggccaacagaaacaccccattagataataacttcaCTGGAGTTTTCAAAGTCAGTGATGAGGGGAATCTTGTTGTACTTGATGGCATTGGTGCAAGTGTTTGGTCTTCCAATGCATCAACCACTTCTCAGAAGCCTATTGTGCAGCTCTTGGACTCCGGCAACCTTGTTGTGAAAGACGGCGGAACAAATAGTCCAGAGAAGGTTGTGTGGCAAAGCTTTGATTTTCCTGGTGACACTTTGCTTCCTGGGATGAAACTCAGAAGCAGTCTTGTGACAGGTGCACATAGTTCTCTGACATCGTGGAGGGACACAGAAGATCCTGCTCTGGGGGAATATTCTATGTATATCGATCCTCGTGGTTTTCCTCAGAGAGTGACTACAAAGGGAGGGACTTGGTTGTATAGAGCTGGTTCATGGAATGGTTATCAATTTTCAGGTGTTCCTTGGCAGCTGTTGCATAATTTCTTCAATTACTATTTTGTGTTAACCCCAAAGGAAGTGTATTATGAGTATGAACTCTTGGAGCCTTCGGTTGTTACAAGGTTTGTGATCAACCAAGAAGGGCTTGGTCAACGTTTCACTTGGTCAGAGAGGACACAGAGTTGGGAGCTTTTCGCCTCCGGCCCCAGGGATCAGTGTGAGAACTATGGCTTGTGTGGTGCAAATTCTGTTTGTAAAATTAATAGCTACCCCATATGTGAATGCTTGGAGGGATTTCTCCCAAAGTTCGAGGAAAAGTGGAGATCATTGGATTGGTCTGATGGGTGTGTTCGGGGAACGAAACTGGGTTGTGACGATGGAGATGGATTTGTTAAGTATGAAGGAATGAGATTGCCAGACACGTCTTCGTCCTGGTTTGACACAAGCATGAGCCTTGATGAATGTGAGAGTGTGTGTTTGAAAAACTGCTCTTGCACAGCATACACAAGCTTAGATATCAGAGGTGACGGGAGTGGCTGCTTGCTTTGGTTTGGTAACATTGTGGATATGGGAAAACATGTCTCCCAAGGACAAGAGATTTACATACGAATGGCTGCTTCAGAGCTAGACCAAACTTGGCATAAAAGGCACGCTAGCACCAAGCTTGTGGTGATTTTGGCAACAATCGCTACGTTCATCGTAGGCTTAATATTAGGATCAGTCATATACATACGGAGAAAACTAGGGAAACCAGGAAAGACAAATATAATCGACCAGATGCATCACTCTATAAAACATGAGAAGAAAGACATCGACTTACCAACCCTTGATTTATCAACCATTGATAATGCAACCAGTAATTTCTCTGCCAGTAACATATTGGGAGAAGGTGGATTTGGACCAGTTTACAAGggtgtgctggcaaatggacaagagattgctgttaagaggctttccaaaaattctggacaaggattagatgagttcagaaatgaagttgtgttgattgccaatcttcagcaccggaatcttgtaaagattcttgggtgttgtattcaagatgatgagagaatcttgatctatgaattcatgcctaacaggagcttggatctttacatttttgatcgaacaagaaagaaattattggattggaacaaacgcttccaaattataagtggcattgctagagggcttctgtatcttcatcatgattctagactaaggatcattcacagagatatcaaaacaagcaatattcttcttgataatgatatgaatccaaagatatcagactttggactagcaaggatgcttgttggcgatcacaccaaagccaatacaaaaagagtagttggaactcatggttacatgcctcctgagtatgcagtgtatggatctttttcagtgaaatcagatgtctttagctttggtgttattgtactagagatagttagtgggaggaagaacacaaaatttcttgatccactcaatcaacttaaccttattgggcatgcatggagattgtggagtgaagggaggactttggaactgattgatgaatcactggacgattcaatcattgaaagtgaagtgttgaaaattgttcacgtgggactcttgtgtgttcaagagagaccagaggacaggcccaacatgtcaagtgtggttctaatgctgaatggTGACAGACCATTGCCCAGGCCCAAGCTCCCCGCTTTTTATCCACACCAAGAAGATTTTTCTTCATCCAGCAAGTGTGAATTCAGCTCAAATGAGTTGTCCATCACTTTAGAGGCAAGATAG 2454 0.2755 MDSYEVMIVWFSLLFSLIPSISTRLSSITLDQPLHHNETLVSASGTFEAGFFSTGSSQRQYFCICYKNISPRTIVWVANRNTPLDNNFTGVFKVSDEGNLVVLDGIGASVWSSNASTTSQKPIVQLLDSGNLVVKDGGTNSPEKVVWQSFDFPGDTLLPGMKLRSSLVTGAHSSLTSWRDTEDPALGEYSMYIDPRGFPQRVTTKGGTWLYRAGSWNGYQFSGVPWQLLHNFFNYYFVLTPKEVYYEYELLEPSVVTRFVINQEGLGQRFTWSERTQSWELFASGPRDQCENYGLCGANSVCKINSYPICECLEGFLPKFEEKWRSLDWSDGCVRGTKLGCDDGDGFVKYEGMRLPDTSSSWFDTSMSLDECESVCLKNCSCTAYTSLDIRGDGSGCLLWFGNIVDMGKHVSQGQEIYIRMAASELDQTWHKRHASTKLVVILATIATFIVGLILGSVIYIRRKLGKPGKTNIIDQMHHSIKHEKKDIDLPTLDLSTIDNATSNFSASNILGEGGFGPVYKGVLANGQEIAVKRLSKNSGQGLDEFRNEVVLIANLQHRNLVKILGCCIQDDERILIYEFMPNRSLDLYIFDRTRKKLLDWNKRFQIISGIARGLLYLHHDSRLRIIHRDIKTSNILLDNDMNPKISDFGLARMLVGDHTKANTKRVVGTHGYMPPEYAVYGSFSVKSDVFSFGVIVLEIVSGRKNTKFLDPLNQLNLIGHAWRLWSEGRTLELIDESLDDSIIESEVLKIVHVGLLCVQERPEDRPNMSSVVLMLNGDRPLPRPKLPAFYPHQEDFSSSSKCEFSSNELSITLEAR 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02504 817 Pfam PAN-like domain 341 407 IPR003609 -
Gma13g02504 817 ProSiteProfiles PAN/Apple domain profile. 341 422 IPR003609 -
Gma13g02504 817 SMART serkin_6 505 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02504 817 Pfam S-locus glycoprotein domain 211 319 IPR000858 GO:0048544
Gma13g02504 817 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 184 IPR036426 -
Gma13g02504 817 Gene3D Phosphorylase Kinase; domain 1 478 580 - -
Gma13g02504 817 PANTHER - 9 814 - -
Gma13g02504 817 CDD STKc_IRAK 511 778 - -
Gma13g02504 817 CDD B_lectin 31 153 IPR001480 -
Gma13g02504 817 Pfam D-mannose binding lectin 73 179 IPR001480 -
Gma13g02504 817 PIRSF SRK 2 817 IPR024171 GO:0004674
Gma13g02504 817 Gene3D Hepatocyte Growth Factor 338 421 - -
Gma13g02504 817 ProSiteProfiles Protein kinase domain profile. 505 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02504 817 SMART ntp_6 342 421 IPR003609 -
Gma13g02504 817 ProSiteProfiles Bulb-type lectin domain profile. 25 147 IPR001480 -
Gma13g02504 817 PANTHER - 9 814 - -
Gma13g02504 817 SMART blect_4 31 153 IPR001480 -
Gma13g02504 817 Gene3D Transferase(Phosphotransferase) domain 1 581 781 - -
Gma13g02504 817 Pfam Protein tyrosine and serine/threonine kinase 508 774 IPR001245 GO:0004672|GO:0006468
Gma13g02504 817 Gene3D - 21 150 IPR036426 -
Gma13g02504 817 CDD PAN_AP_plant 337 422 - -
Gma13g02504 817 SUPERFAMILY Hairpin loop containing domain-like 345 407 - -
Gma13g02504 817 SUPERFAMILY Protein kinase-like (PK-like) 492 798 IPR011009 -
Gma13g02504 817 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02504 Gma-Chr13 39946349 39950479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02504 435 793 Receptor kinase-like Gene Family AT4G23190 50.138 3.17e-121 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma13g02504 PK_Tyr_Ser-Thr 1.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02504 - - gmx:106794307 1659.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02504 13 39946349 39950479 Gma13g02504 13 39946349 39950479 ECH
Gma12g01308 12 18931783 18935789 Gma13g02504 13 39946349 39950479 PCT
Gma06g02349 06 44681057 44715282 Gma13g02504 13 39946349 39950479 PCT