Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02503 ATGGGCCTACCAATAGTATCTTTGAGGCAGTTGCTTTACGCTTTCTCCTTCATGATGATATGGCAATTGGCAAAGAAGGGAGAAGAATGGTTTCCATCATCATGGAAAAGTGCTGATGATCCTGGCCAAGGAGAGTACTCTTTCAAAATAGACCGCAGAGGATTTCCACAAGCAGTTCTTTTGAAGGGGACCACTATAAGCACTAGATTTGGTCCATGGAATGGCTTTTACTTTTCAGGGTCTTTGATTGATTCACGTAGTCCAGATGTTCAAATTGAGTTCGTTTTGACTAAAAAAGAAACATTTTCTCAGTTCCAGGCTCTAAAGAAATCTCTTTCCTACAGATTTTGGGTGACCACCAAGAGGAACGCGTTGGTTTCTCTTTGGGAAAGTCAAGTCAGTGACTGGCACACTCTCTATACTCAACCATCATCCCCGTGTGAATATTATGGGAAGTGTGGAGCAAATAGCGTTTGCAATGCGAACAATCCTAGGTGCACATGCTTGGATGGATTTGTTGCACACATCAATCGGTCCATGGGTTGTGTTCGAACCATTCGCTTGACTTGTAACAAAGACGGGTTCAGGAGGTACACAGGCATGGTTCTTCCCGATACATCCTCATCTTGGCATTACCCACAAGCTCAAGGGGGGCAGGACATTTATATACGATACTCTGATTCAGAGCTAGATCACAGTCACAAAAATGGTTTAAGCAAGAGGAAGATTGAAGCCATCATCAGTTGCTCTACCACATTCGTCATGTGCATGATACTAGGATTGGCCATATGGTTATGGAAAAGGAAGGTCGAAATGGAAGGGATGAAAAAAATATTTCATCAAAGTCGTCACAACTCTAAACTAAGGAaggaagagccggacttaccagcatttgacttgcctttcattgctaaagccactgataacttctcagacgctaacaaactaggagaaggtggttttggaccagtgtacaagggtactctaatagatggacaagacatagttgtgaaacggctttcaaacacctccggtcagggtatggaagaatttaaaaatgaagttgcactgattgccagacttcaacaccgtaatcttgtgaagcttcatggttattgcattcaagaggaagaaaaaatgttgatatatgaatacatgcccaacaagagcttggactactttatttttgatgaaattagaagcaaaatattggattggagtaagcgattccatattattggtggcattgctcgagggctagtgtatcttcatcgagactctagattgagtattattcaccgagatttgaaagccagcaatattctactggatgaaaatatgaattctaaaatatcagactttggccttgctcgcacattatggggagatcaagtagatgctaacactaacaagattgcctggacatatggatacatgcctaccgaatatgctgtacatgggcatttctcaatgaaatccgatgtctttagttttggtgtcatggtgttagaaatagtaagtgggaagaaaaacagagatttttctgatccagaacactttctaaatcttcttggacatgtaagGGTGATGGCTTTCCATGTTTGA 1605 0.2374 MGLPIVSLRQLLYAFSFMMIWQLAKKGEEWFPSSWKSADDPGQGEYSFKIDRRGFPQAVLLKGTTISTRFGPWNGFYFSGSLIDSRSPDVQIEFVLTKKETFSQFQALKKSLSYRFWVTTKRNALVSLWESQVSDWHTLYTQPSSPCEYYGKCGANSVCNANNPRCTCLDGFVAHINRSMGCVRTIRLTCNKDGFRRYTGMVLPDTSSSWHYPQAQGGQDIYIRYSDSELDHSHKNGLSKRKIEAIISCSTTFVMCMILGLAIWLWKRKVEMEGMKKIFHQSRHNSKLRKEEPDLPAFDLPFIAKATDNFSDANKLGEGGFGPVYKGTLIDGQDIVVKRLSNTSGQGMEEFKNEVALIARLQHRNLVKLHGYCIQEEEKMLIYEYMPNKSLDYFIFDEIRSKILDWSKRFHIIGGIARGLVYLHRDSRLSIIHRDLKASNILLDENMNSKISDFGLARTLWGDQVDANTNKIAWTYGYMPTEYAVHGHFSMKSDVFSFGVMVLEIVSGKKNRDFSDPEHFLNLLGHVRVMAFHV 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02503 534 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 215 528 - -
Gma13g02503 534 SMART serkin_6 310 529 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02503 534 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 215 528 - -
Gma13g02503 534 Gene3D Transferase(Phosphotransferase) domain 1 386 531 - -
Gma13g02503 534 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 21 211 - -
Gma13g02503 534 Pfam Protein tyrosine and serine/threonine kinase 314 522 IPR001245 GO:0004672|GO:0006468
Gma13g02503 534 Gene3D Phosphorylase Kinase; domain 1 270 385 - -
Gma13g02503 534 Pfam S-locus glycoprotein domain 69 174 IPR000858 GO:0048544
Gma13g02503 534 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 21 211 - -
Gma13g02503 534 ProSiteProfiles Protein kinase domain profile. 310 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02503 534 SUPERFAMILY Protein kinase-like (PK-like) 292 530 IPR011009 -
Gma13g02503 534 ProSitePatterns Serine/Threonine protein kinases active-site signature. 431 443 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02503 Gma-Chr13 39932715 39935860 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02503 254 527 Receptor kinase-like Gene Family AT4G05200 53.873 7.17e-99 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma13g02503 PK_Tyr_Ser-Thr 8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02503 - - gsj:114373347 871.692