Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02477 ATGGATCATCTACAACATCAAGAGATGGTAGACATTGAGTCACAAACCGTGGAAATCCCTGACATACTCCACAAAGGAAAACGTCAAGTGATTCTTAAGTTTGATAACGTTGTGTATAAAATTAAGACCAAGAAAGGTGGAGTATTTGTGAAGAACAAAGAGACAGAAGAGAAAGAGATACTGAAGGGAGTGAAAGGTGTTGTTGAGCCTGGTGAAATGCTAGCCATGTTAGGTCCATCTGGGAGTGGCAAAACAACTCTACTCACAGCATTGGGAGGAAGGCTTAGAGGGAAGCTTTATGGAAGCATAACTTACAATGGTGAAGCCTTCTCAAATTCCATGAAGAGGAACACTGGCTTTGTCACACAAGATGATGTTCTCTACCCTCACTTGACTGTGACTGAGACCCTAGTCTTCACTGCACTTCTCAGGTTGCCCAACACTATCTCCAAAGAAGAGAAAGTTAAGAAAGCAAAAGATGTTATTGATCAACTTGGTTTAACCAAGTGCAAGGATAGCATAGTTGGAAGCCCTTTCTTGAGGGGGGTTTCTGGGGGTGAGAGAAAGAGGGTTAGCATTGGACAAGAAATGCTCATAAACCCAAGCTTGTTGTTTCTTGATGAACCTACCTCTGGCCTAGACTCAACCACAGCACAAAGAATTGTCTCAACTTTGTGGGAGCTTGCATGTGGAGGAAGAACTATTGTGATGACTATACACCAACCTTCAAGTAGACTTTACTACTTGTTTCATAAGGTGTTGTTGCTATCAGAAGGGAACTCATTGTATTTTGGAAAGGGATCTGAAGCCATTGAATACTTCTCTAACATTGGATATGCCCCAGCCTTGGCCATGAACCCTGCAGACTTCCTTTTGGATCTTGCAAACGGTATCTACACTGATGAATCTAATACGGATCATGCCATAGATAAACAAAAATTGGTTTCGATGTGTAAGATAAACTGTGCTGCTCAATTGAAGCCAGCAGCACTTGAAGGAATCAATGACTCTAGTAAAAGCCAGAATAGATTTCAAGAAAAGGGCTCCGAAAAATGGCCTACCAGCTGGTCTCAGCAATTCACTGTGTTGTTAAGAAGAGACATCAAAGAGAGAAGGCATGAATCATTCTCTGCTTTGCGGGTTGCTCAGGTCTTTGTGGTTGCTCTTATTTCAGGACTACTGTGGTATAAGTCTGATATCTCACACTTACAGGATCAGATTGGGCTTCTATTCTTCGTATCCGGCTTTTGGGGTTTCTTCCCTCTCTTTCAAGCAATTTTCACCTTTCCCCAAGAGCTATTGATGCTAGAGAAAGAAAGATCTTCTGGAATGTACCGGCTTTCATCATACTTTATGTCAAGGGTGGTAGCTGACCTTCCCATGGAACTTAGTCTTCCCACCATATTTATTCTCATAACCTATTGGATGGCAGGGTTGAAAGGCAAACTGCTCAACTTCTTATACACATTGCTCACCCTCTTACTCCACGTCTTAGTCTCACAAGGCCTTGGCCTCGCCCTCGGCGCCACTGTGATGGACCAAAAAGCTGCAACCACACTTGCCTCAGTGCTCATGCTGTGTTTCTTGCTTGCTGGTGGTTTTTATGTTCAGCATGTTCCAGTGTTTATTTCATGGGTGAAGTACATTTCCATCAACTACTACAACTACCAGCTCTTTATCGCGTCTCAATATAGCGATGGCGAGACATACCCTTGTTCTACTGGCCAGTGTCGAGTTGCCGAATTTCCTTCTATAAAGCAAACAGGGTTTCATTTCAATCTGCAAGAGCAAGTCATGGCTGCATCAGCTCTTGTGATAATGATGATAGGTTACAGACTTATAGCCTATGTTGCTCTCATGAGGATTGGAGTGACAAAGAAATAG 1884 0.4283 MDHLQHQEMVDIESQTVEIPDILHKGKRQVILKFDNVVYKIKTKKGGVFVKNKETEEKEILKGVKGVVEPGEMLAMLGPSGSGKTTLLTALGGRLRGKLYGSITYNGEAFSNSMKRNTGFVTQDDVLYPHLTVTETLVFTALLRLPNTISKEEKVKKAKDVIDQLGLTKCKDSIVGSPFLRGVSGGERKRVSIGQEMLINPSLLFLDEPTSGLDSTTAQRIVSTLWELACGGRTIVMTIHQPSSRLYYLFHKVLLLSEGNSLYFGKGSEAIEYFSNIGYAPALAMNPADFLLDLANGIYTDESNTDHAIDKQKLVSMCKINCAAQLKPAALEGINDSSKSQNRFQEKGSEKWPTSWSQQFTVLLRRDIKERRHESFSALRVAQVFVVALISGLLWYKSDISHLQDQIGLLFFVSGFWGFFPLFQAIFTFPQELLMLEKERSSGMYRLSSYFMSRVVADLPMELSLPTIFILITYWMAGLKGKLLNFLYTLLTLLLHVLVSQGLGLALGATVMDQKAATTLASVLMLCFLLAGGFYVQHVPVFISWVKYISINYYNYQLFIASQYSDGETYPCSTGQCRVAEFPSIKQTGFHFNLQEQVMAASALVIMMIGYRLIAYVALMRIGVTKK 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02477 627 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 32 283 IPR003439 GO:0005524
Gma13g02477 627 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 19 623 - -
Gma13g02477 627 SMART AAA_5 70 268 IPR003593 -
Gma13g02477 627 Pfam ABC transporter 61 211 IPR003439 GO:0005524
Gma13g02477 627 ProSitePatterns ABC transporters family signature. 183 197 IPR017871 GO:0005524
Gma13g02477 627 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 19 623 - -
Gma13g02477 627 Gene3D - 49 277 IPR027417 -
Gma13g02477 627 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 276 IPR027417 -
Gma13g02477 627 Pfam ABC-2 type transporter 358 564 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02477 Gma-Chr13 39615166 39618713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02477 68 297 Calmodulin-binding Proteins AT2G36910 28.452 3.53e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02477 K05681 - gmx:100816135 1184.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02477 13 39615166 39618713 Gma13g02477 13 39615166 39618713 ECH