Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02455 ATGGAAGCACCATGGGCCACAACAAGTTCAAGCATAGTTTTTGTGATAGTGATACTTGCTCTAACATCATGGGCATGGAGGATGTTGAATTGGCTATGGATAAGGCCAAAGAGGCTAGAGAGGCTCCTAAGGGAACAAGGCCTTCAAGGAAACCCCTACAGGATATTGGTTGGGGACTTAAAGGAGATTGTGAAGTTGCAAATGGAAGCAAGATCCAAACCCATGAATCTCTCCCATGATATTGTGCCACGTGTGTTTGCACATCTGCATCAGAGTGTCCTCAAACATGgcaagaattcttttatttggtttggaccaaaaccaagggtgaccctcacagatcctgagctgatcaaagatgtacttaacaagatcagtgatttccgaaagcctgaagcaaatccacttgccaaattactagctactggtcttgtaaactatgatggagaaaaatggaacaagcacagaagattaattaatcctgcattcagtttagaaaaattgaagattatgttaccaatattcttcaaaagttgcaatgatctaattatcaagtgggagggaatgttgtcttctgatggatcatgtgaaatggatgtttggcctttccttcaaaatttagctagtgatgttattgcgagaacagcatttggaagtagttttgaagaaggaaaaagaatatttcaacttcaaaaagagctagcggaacttacaatgaaagttatcatgaaagtttacatccctggatggagatttgtacctactgcaaccaatcggagaatgaaggaaattgatagatatataaaagcttcacttacggacatgattaagaagagagagaaagcaccaaagacaggtgaagctactagggatgacttgttaggtatacttctggagtcaaatcacaaggaaatacaagaacacagaaacaataagaatgttggaatgaatctcaatgatgtaatcgaggaatgcaagttattctactttgcagggcaagagaccacttcagttttacttgtttggacaatggtgttgttaagtaggtaccctgattggcaatcacgtgcaagggaggaagtcttacaagtctttggcaaacaagcaccaaattttgatgggctaagtcaccttaagattgtcaccatgattttgtatgagGATATGATCTATGGCACTTGTGTCACAGCTTCCAAGTCACTGATTTTCAGAGCGTTAGTGTTGCAGAAGCCATTAAATTTTCAAGTAAAATTCTCCTCCAAGTGTTTTCCTACGAAGATAAGAATGGAAAGTAATCTTAATCATAGCATAGAGGGCAACAATAAAGCGTCTAGGGGTGCCTTGGTTGTCCTAGAAGGCTTGGATCGTTCTGGGAAGTCTTCTCAGTGTAGCAGGCTAGTGTCCTTCTTGGAGGGACAAGGGATCTCTGCTGAATTATGGAGATTTCCCGACAGAACTACAAATGTTGGGCAAATGATATCTGCCTATCTAACTAACACATCTCAGTTGGATGATCATACTATTCATCTCCTCTTCAGCGCTAATCGTTGGGAAAAGAGGTCATTGATGGAATCAAAACTGAAAACTGGAACAACCCTCATTGTTGACCGTTATTCTTATTCTGGGGTGGCTTTCTCATCTGCCAAGGGACTTGATTTTGAATGGTGTAAGGTCCCAGAGATTGGATTGCCAGCACCAGATGTGGTAGTATACCTTGACATATCTCCAGAGAAAGCTGCAGAAAGAGGAGGGTATGGAGGTGAGAGATATGAAAAGCTGGAGTTTCAGAAGAAAGTTGCTGATTGGTACAAAGTTCTTCATGATGTTTCCTGGAAGGTCATTTTGCATGATGTGATTGACATTGATGACGACTCTGAGGATGTAGTGATAATTGGTGAAAAAGTTAATAATAGTAACAAAGGGAAGACAATTGACGCCGTTCATGATGATCATCAAGTTGTGAAAACGGCTGATTATACTTACTCTCTGCCTGGTGTGGAAAATTTTGGATCAGTTAGTGGGATTGCATCTTCTAACAATTTTCCTTCAGTGTCAAATAATATGATCAACATTGATGGTCATGGGTCTGATCTATCATATGACGATGATGACTACATTGATATTTTGTCGGAAGATTATATGGATGTAGATGAGTATGCTTTATTACAGAAACACTTTGATAATGTGGATATACCTCCTGGAATTGAAGCACCTTTTACTTGGTTGCCACCAGACTATGTTGTAGGTTCAAAGAAGACTGAAAATAGTACATTGTATCCTTGGCATCATATGCAATCTAATGCTAATAAAAGTCCCATGACACCCTCTTCTCAGCCCTCTTTGTCATTAGAGCCAACTAACTCTAAAATTCAAGCATCTTTAGGGAGTGCTATTAACATTCCAATCAAAATGGGTAATGTTGATCACTCTTCCGGAGCAGAGTTGTCTTCTCAATTTTTTTCTGAACCTGCCCCTTCTAAGATGAAATCAGCTACTTCAAAACTCAGAGGGTGTACTTCAAATGCTTCATTAGGAGTGGAGTCATCTAAGTCTCAGTGGTTTTCGAGGCCTTTCCATAGTAAAAAGAAGCCTGCTTCAACATACCATGGTTTTAACTACCATCCAGAGGCCACGAAGCTGCCACATGCAGGTGAGCTGCCATATTGGGGGCAATTTAAAACTGCTAAGAAGGAAGCTGGCAGTAGCATTTCATCCCATTCAACTTTCATTGGACATCATGGATCATTGTATCCTCCAGGAATAGAATCAGGAAAAACTTGGTGGAAGATTTCTCATAATACTAAACCATTTTCTACTCATCTTAATAATATTCCTAATCATATTTATTATCCATTTGATCCTCTTGTTGCCCATCCGGAGCATGTGTTTGATAACAACTGGGTTAACGATTCTGCCAGAGATGGATTTGATGGAAAAACTGTGGATGGCCCTATTGTGACAATATCGGATGAAGCCAAAGAGGAAATTCTGAGGAAACTCCAAAGTTTTAAACAATTTGACACTGTTGAAGACACTTCAGACCATCACTTTTTTCGCAGTAATTCTTCAATGCATCAGCCTCCCAAGAATTGGGCTAAAAAAATCCAGGAAGAGTGGAGGATTTTGGAGAAGGATTTGCCAGCTTCAATATTTGTCAGAGTTTATGAATCAAGGATGGATCTTTTAAGGGCTGTGATTATTGGAGCAGAAGGGACTCCTTATCATGATGGCCTTTTCTTTTTTGATGTTTTCTTTCCCAGTGCCTATCCCAATGTACCGCCGaaagtccactaccactctggaggtcttcggctcaacccaaatttgtatgcttgtggcaaagtatgccttagtctacttaacacctggtccggcagcaaaaatgagaagtgggttccaggcatgtcaacaattctccaggttctggtatctatacaaggtctaatcctgaatactaagccttactttaatgaacctggatatgcacacatgagtggttcagcaaatggtgaaaagaTGTCTTTTCAGTATAATGAGGACACATTCATTCTATCATTGAGGACAATGATGTATATGATACGAAAGCCTCCAAAGAATTTCGAGGACCTTGTTAAGGGGCATTTCTGCAACCGAGCTAGCGATATTCTGGTGGCATGTAAGGCATACATGGAAGGTGCTCAAGTTGGGTGTTTGGTCAAAGGAGGGGTTCAGGACGTTGATGAGGGAGACAGAAGCTGCTCACAGCAGTTCAAGGATTCTTTATCCGGATATATGAACATGCTTGTCAAAGAATTTGCTAAAGTTGGAGCAAAGGACATTGATAAATTGCTGCCTCCAGCAACAACTCCAGTAGCGATCAAACCATCAGGTGGCTCCCTCAACTTCTATCCCAATTTAGAAGCTGCACAAAAGCTTCATTGCTTTCACGCGTTCTTTGGCCTCTTCTTCAAGACGACTTGTTAG 3963 0.2967 MEAPWATTSSSIVFVIVILALTSWAWRMLNWLWIRPKRLERLLREQGLQGNPYRILVGDLKEIVKLQMEARSKPMNLSHDIVPRVFAHLHQSVLKHGKNSFIWFGPKPRVTLTDPELIKDVLNKISDFRKPEANPLAKLLATGLVNYDGEKWNKHRRLINPAFSLEKLKIMLPIFFKSCNDLIIKWEGMLSSDGSCEMDVWPFLQNLASDVIARTAFGSSFEEGKRIFQLQKELAELTMKVIMKVYIPGWRFVPTATNRRMKEIDRYIKASLTDMIKKREKAPKTGEATRDDLLGILLESNHKEIQEHRNNKNVGMNLNDVIEECKLFYFAGQETTSVLLVWTMVLLSRYPDWQSRAREEVLQVFGKQAPNFDGLSHLKIVTMILYEDMIYGTCVTASKSLIFRALVLQKPLNFQVKFSSKCFPTKIRMESNLNHSIEGNNKASRGALVVLEGLDRSGKSSQCSRLVSFLEGQGISAELWRFPDRTTNVGQMISAYLTNTSQLDDHTIHLLFSANRWEKRSLMESKLKTGTTLIVDRYSYSGVAFSSAKGLDFEWCKVPEIGLPAPDVVVYLDISPEKAAERGGYGGERYEKLEFQKKVADWYKVLHDVSWKVILHDVIDIDDDSEDVVIIGEKVNNSNKGKTIDAVHDDHQVVKTADYTYSLPGVENFGSVSGIASSNNFPSVSNNMINIDGHGSDLSYDDDDYIDILSEDYMDVDEYALLQKHFDNVDIPPGIEAPFTWLPPDYVVGSKKTENSTLYPWHHMQSNANKSPMTPSSQPSLSLEPTNSKIQASLGSAINIPIKMGNVDHSSGAELSSQFFSEPAPSKMKSATSKLRGCTSNASLGVESSKSQWFSRPFHSKKKPASTYHGFNYHPEATKLPHAGELPYWGQFKTAKKEAGSSISSHSTFIGHHGSLYPPGIESGKTWWKISHNTKPFSTHLNNIPNHIYYPFDPLVAHPEHVFDNNWVNDSARDGFDGKTVDGPIVTISDEAKEEILRKLQSFKQFDTVEDTSDHHFFRSNSSMHQPPKNWAKKIQEEWRILEKDLPASIFVRVYESRMDLLRAVIIGAEGTPYHDGLFFFDVFFPSAYPNVPPKVHYHSGGLRLNPNLYACGKVCLSLLNTWSGSKNEKWVPGMSTILQVLVSIQGLILNTKPYFNEPGYAHMSGSANGEKMSFQYNEDTFILSLRTMMYMIRKPPKNFEDLVKGHFCNRASDILVACKAYMEGAQVGCLVKGGVQDVDEGDRSCSQQFKDSLSGYMNMLVKEFAKVGAKDIDKLLPPATTPVAIKPSGGSLNFYPNLEAAQKLHCFHAFFGLFFKTTC 1320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02455 1320 TIGRFAM DTMP_kinase: dTMP kinase 445 613 IPR018094 GO:0004798|GO:0005524|GO:0006233
Gma13g02455 1320 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 39-RELATED 594 1279 - -
Gma13g02455 1320 Gene3D - 439 654 IPR027417 -
Gma13g02455 1320 PRINTS E-class P450 group I signature 340 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma13g02455 1320 PRINTS E-class P450 group I signature 93 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma13g02455 1320 PRINTS E-class P450 group I signature 207 225 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma13g02455 1320 PRINTS E-class P450 group I signature 320 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma13g02455 1320 Pfam Ubiquitin-conjugating enzyme 1035 1163 IPR000608 -
Gma13g02455 1320 Gene3D Ubiquitin Conjugating Enzyme 989 1272 IPR016135 -
Gma13g02455 1320 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 445 633 IPR027417 -
Gma13g02455 1320 SUPERFAMILY UBC-like 1015 1197 IPR016135 -
Gma13g02455 1320 SMART ubc_7 1033 1190 - -
Gma13g02455 1320 ProSitePatterns Thymidylate kinase signature. 534 546 IPR018095 GO:0004798|GO:0005524|GO:0006233
Gma13g02455 1320 SUPERFAMILY Cytochrome P450 82 388 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma13g02455 1320 Hamap Thymidylate kinase [tmk]. 447 643 IPR018094 GO:0004798|GO:0005524|GO:0006233
Gma13g02455 1320 Pfam Cytochrome P450 95 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma13g02455 1320 CDD UBCc 1033 1159 IPR000608 -
Gma13g02455 1320 Pfam Thymidylate kinase 451 607 IPR039430 -
Gma13g02455 1320 Gene3D Cytochrome P450 33 393 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma13g02455 1320 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 1030 1190 IPR000608 -
Gma13g02455 1320 MobiDBLite consensus disorder prediction 763 785 - -
Gma13g02455 1320 CDD TMPK 448 629 - -
Gma13g02455 1320 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 594 1279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02455 Gma-Chr13 39350084 39377600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02455 10 460 Cytochrome P450 AT3G14690 48.140 2.99e-139 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02455 K10581 - gmx:100810772 1360.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02455 13 39350084 39377600 Gma13g02455 13 39350084 39377600 ECH