Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02444 ATGGAACTTGAGATACGTGTTTGTCTCTTGTTGTTTCTCTTTGGTATACTCTCTGGCTCTCAAGCCTACACGTTCTATGTTGGTGGAAAAGATGGGTGGGTTTTGTACCCTTCTGAGAATTACAATCACTGGGCTGAAAGGATGAGGTTCCAAGTTAGTGACACTCTTGTTTTTAAGTACAAGAAGGACTCAGATACTGTGTTGGTGGTGAACAATGATGATTATGAGAAATGTAACAAGAAGAACCCGATCAAGAAGTTTGAGGATGGTGACTCGGAGTTTCAGTTTGATAGATCGGGTCCATTTTACTTCATTAGTGGGAAAGATGATAATTGTGAGAAGGGTCAGAAATTGATTATTGTGGTGTTGGCTGTGAGAGAGCCACCTCCTTATTATTCTCCGACAcctccaaacactccttacgttccaattactcctccaaaagcaccttatcatccaaatccaccttatgttccaacccctccaaacactccttatgttccaattactcctccgagagcaccttatacaccttctccaatttatagtcctccaaatgttcccactactactccaaaaacacctCCCCCTGGCAACCAACCTTATGTCCCAACTCCCTCAAACACTCCTTCTCCTATTTCTCAACCTCCCTACACTCCAACCCCTCCAAAAACGCCTTCCCCTGCCCATCAACCACCCTTTGTTCCAATAACCCCATCTCCAACATCTCAACCACCTTACATTCCCACACCTCCAAACACCACTCCTTCACCCACTTCCCAACCTCCTTCCATTGCAGCACCTCCAAACTCTCATTCCCCAACATCTCAACCACCTTACATTAATCCAACACCTCCAAACACTCCTTCCCCAACATCTCAACCACCCTACCCATCATCGCCCTATCCATCCACCATCCCTCCCTCAACCTCACTCTCTCCATCTTACCCACCTTCTGCTTCAACTGCACCACCCACTTACCCACCCTCTTCCTCCCTCACCCCGGCAACATCGCCGCCATTACCGTCTGCGGCGGCAACAACCCCCTCGCCGTCGTCGTCGTCGGGATCATCTCAAACGCCGTCGTCGTCGAACGAAACGACGCCAGCCAGACTAAACGGTGCGTCGTCTATAACGCCGTCGCGGTTTGGAGTGTATTCACTAACCAttctggtcggtgctgctctaagcaccactcttggttag 1206 0.4022 MELEIRVCLLLFLFGILSGSQAYTFYVGGKDGWVLYPSENYNHWAERMRFQVSDTLVFKYKKDSDTVLVVNNDDYEKCNKKNPIKKFEDGDSEFQFDRSGPFYFISGKDDNCEKGQKLIIVVLAVREPPPYYSPTPPNTPYVPITPPKAPYHPNPPYVPTPPNTPYVPITPPRAPYTPSPIYSPPNVPTTTPKTPPPGNQPYVPTPSNTPSPISQPPYTPTPPKTPSPAHQPPFVPITPSPTSQPPYIPTPPNTTPSPTSQPPSIAAPPNSHSPTSQPPYINPTPPNTPSPTSQPPYPSSPYPSTIPPSTSLSPSYPPSASTAPPTYPPSSSLTPATSPPLPSAAATTPSPSSSSGSSQTPSSSNETTPARLNGASSITPSRFGVYSLTILVGAALSTTLG 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02444 401 MobiDBLite consensus disorder prediction 177 346 - -
Gma13g02444 401 CDD OsENODL1_like 23 123 IPR041846 -
Gma13g02444 401 MobiDBLite consensus disorder prediction 347 379 - -
Gma13g02444 401 PANTHER BLUE COPPER PROTEIN 1 317 IPR039391 GO:0009055
Gma13g02444 401 Pfam Plastocyanin-like domain 33 116 IPR003245 GO:0009055
Gma13g02444 401 Gene3D - 21 126 IPR008972 -
Gma13g02444 401 ProSiteProfiles Phytocyanin domain profile. 23 124 IPR003245 GO:0009055
Gma13g02444 401 SUPERFAMILY Cupredoxins 22 123 IPR008972 -
Gma13g02444 401 PRINTS Proline rich extensin signature 128 140 - -
Gma13g02444 401 PRINTS Proline rich extensin signature 171 183 - -
Gma13g02444 401 PRINTS Proline rich extensin signature 188 209 - -
Gma13g02444 401 PRINTS Proline rich extensin signature 147 163 - -
Gma13g02444 401 PANTHER EARLY NODULIN-LIKE PROTEIN 2 1 317 - -
Gma13g02444 401 MobiDBLite consensus disorder prediction 177 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02444 Gma-Chr13 39218153 39220370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02444 3 134 Phytocyanin Superfamily AT4G27520 52.273 1.39e-45 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02444 - - gmx:100809181 320.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02444 13 39218153 39220370 Gma13g02444 13 39218153 39220370 ECH