Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02432 ATGGACAACTCTTCCTACCACCACTTGGACCACACTGAAGCTCACTTGCCACCTGGTTTTCGGTTCCACCCTACAGATGAGGAGCTCATAACTTACTACCTTCTCAAGAAGGTTCTTGACAGCACCTTCACTGGTAGAGCCATAGCTGAAGTTGACCTCAACAAGAGTGAGCCATGGGAGCTTCCTGAGAAAGCTAAGATGGGAGAGAAAGAGTGGTACTTCTTCAGCTTACGTGACAGGAAGTACCCAACTGGGTTAAGAACCAATAGGGCTACTGAAGCTGGTTACTGGAAAGCGACTGGGAAAGATAGAGAGATTTATAGCTCAAAAACTTGTTCTTTGGTGGGGATGAAGAAAACCTTAGTTTTCTACCGTGGTAGAGCTCCAAAGGGAGAGAAAAGCAACTGGGTCATGCATGAGTATCGCCTTGAAGGCAAATTTGCTTACCACTACCTTTCTCGCAACTCCAAAGATGAGTGGGTCATATCACGTGTGTTTCAGAAGAGTAACACCGCCACCAACAATGGAGGCTCCGTCATGTCTGCTTCTAGTAACTCCAAGAAGACAAGAATGAACAGCACCACCTCTCTTATCCATGAACCAAGTTCACCCTCAGTTTTCCTTCCACCTCTTCTAGACACTTCACCCTACACCATCACAGCTAACTTCACCGACCGTCACAATGGTTCCTATGACAGCATCACCAAAAAGGAGCACGTGTCCTGTTTCTCCACAATAGCTGCAGCAACAACTGCTGTTGTCTCCCCCAACAACTTCAACAATGCAGGCTTTGACCTTTCACCTTCTCAGCCTCTTGCAACCGACCCATTTGCCAGGTTTCAGAGGAACGTTGATTTTTCTGCTTTTCCAAGTTTGAGGTCACTACAAGACAACCTTCAGTTCCCTTTCGTCTTTTCCACGGCTGCACCGCCCTTCTCCGGCGGCGGTTCCGGCGACTTTCTCAGTTGGCCGGTGCCGGAGGAGCAGAGGCTGATAGATGGTGTTTCCAACATGCCACTGGGAGTGTCGGAGCTTGATTGCATGTGGAGCTACTAA 1056 0.4848 MDNSSYHHLDHTEAHLPPGFRFHPTDEELITYYLLKKVLDSTFTGRAIAEVDLNKSEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKTCSLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLEGKFAYHYLSRNSKDEWVISRVFQKSNTATNNGGSVMSASSNSKKTRMNSTTSLIHEPSSPSVFLPPLLDTSPYTITANFTDRHNGSYDSITKKEHVSCFSTIAAATTAVVSPNNFNNAGFDLSPSQPLATDPFARFQRNVDFSAFPSLRSLQDNLQFPFVFSTAAPPFSGGGSGDFLSWPVPEEQRLIDGVSNMPLGVSELDCMWSY 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02432 351 Gene3D NAC domain 25 173 IPR036093 GO:0003677|GO:0006355
Gma13g02432 351 Pfam No apical meristem (NAM) protein 17 143 IPR003441 GO:0003677|GO:0006355
Gma13g02432 351 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 347 - -
Gma13g02432 351 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-LIKE 7 347 - -
Gma13g02432 351 SUPERFAMILY NAC domain 12 168 IPR036093 GO:0003677|GO:0006355
Gma13g02432 351 ProSiteProfiles NAC domain profile. 16 168 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02432 Gma-Chr13 39068843 39070650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02432 6 351 NAC Transcription Factor Family AT5G53950 54.047 2.11e-121 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma13g02432 NAM 2.3e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02432 - - gmx:100805987 706.442