Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02408 ATGATTAGCAATGGAGTATGCACTCTCCGCACGTGCCTCCGTTTCCCAGCGAGACCACTAttccgagaacctccgcgcttgttcagctgtcggcggcggtttctggtgactgcgtcggaaacgaagaagaaagagaaggtgattgtgATTTCTGGACCCACCGGTTCCGGCAAGAGCCGCCTCGCATTGGAACTCGCAAAGCGCCTCAACGGCGAAATCGTCAGTGCCGACTCCGTCCAGGTGTATCGGGGGCTTGATGTTGGATCTGCAAAGCCTTCCCCAAATGAAAGAAAGGAGGTACCACATCATCTGATTGACATACTGCACCCATCTGAAGACTATTCTGTTGGGCAGTTTTTTGAGGATGCAAGGCAAGCTACAGGATGTATTCTTGACAATGGCCGTGTTCCCATAGTTGTTGGAGGCACTGGATTGTATTTAAGATGGTTCATATATGGAAAGCCAGATGTACCTAAAGCCTCTCCAGAGATTGTATCTGAAGCATATCAAGAGTTAGCTGAACTGCAGAGGAATGATGACTGGGATACAGCTGTGCAGTTGGTGGTAAAAGCAGGTGATCCAAAGGCTCAATTTCTAGCAGTGAATGATTGGTACCGATTACGACGTAGCCTAGAGATTATTAAGTCTAGTGGATCACCTCCTTCTGCTTTTCGGGTACCATATGATTCTTTCAGGGAACAGGGCGAATATGGTGTTGCTGATGGTTCTGAGTTGTCTGATATGAATACTTATGGTGATGCAATGGAAAAAACCAACTCATCAGAGTTAGACTACGAGTTTATGTGCTTTTTCCTTTCTAGCCACAGACTTGACCTCTATAAATCAATTGATTATCGGTGTGAAGATATGCTGTTAGGAAGGGATGGGATTTTGTCTGAGGCTCAATGGCTTCTTGATACAGGTCTTCATCCAAACTCCAATTCTGCAACAAAAGCAATTGGTTACAGACAAGCCATGGAGTACTTACAAAGATGTAGAGAGCAAGGGGGTCACAGTTCTGTTGAAGAATTTTACAAATTCTTGTTTGAATTTCAAAAAGCATCACGGAATTTTGCAAAAAGGCAGTTGACCTGGTTTCGTAATGAAAACATATACCAGTGGCTCAATGCTTCTAAACCTCTGGAAACCATTCTCGACTTCATTCATGGCGCATACCATGATTGGAATGGAAGTATTCTTGTGCCTGAAGACCTAAGAATGTCGAGAGATATTTCTAATCACCGACAAGCTGCACAACTTAAGGCCTACCGCACCAGAAATAGGCATTTCGTGAACGGGGAAGATTGTACTCATATTCTGAACTGGATAAGAAAGACCCAAAGGTTGAAGAGAAAGTTTTATTCTTATTTACATCCTTCTGTCTTTTTGATAGAATACTGTAATGACAACCTAATCTCGGAAAATGGGATGCGGCCCAATGATAAAATGCATCAAAATGACCCTTTTCAAGATGTCCCAAGTCAGTTTTCAGCAAATTCAGAATAA 1506 0.4037 MISNGVCTLRTCLRFPARPLFREPPRLFSCRRRFLVTASETKKKEKVIVISGPTGSGKSRLALELAKRLNGEIVSADSVQVYRGLDVGSAKPSPNERKEVPHHLIDILHPSEDYSVGQFFEDARQATGCILDNGRVPIVVGGTGLYLRWFIYGKPDVPKASPEIVSEAYQELAELQRNDDWDTAVQLVVKAGDPKAQFLAVNDWYRLRRSLEIIKSSGSPPSAFRVPYDSFREQGEYGVADGSELSDMNTYGDAMEKTNSSELDYEFMCFFLSSHRLDLYKSIDYRCEDMLLGRDGILSEAQWLLDTGLHPNSNSATKAIGYRQAMEYLQRCREQGGHSSVEEFYKFLFEFQKASRNFAKRQLTWFRNENIYQWLNASKPLETILDFIHGAYHDWNGSILVPEDLRMSRDISNHRQAAQLKAYRTRNRHFVNGEDCTHILNWIRKTQRLKRKFYSYLHPSVFLIEYCNDNLISENGMRPNDKMHQNDPFQDVPSQFSANSE 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02408 501 MobiDBLite consensus disorder prediction 487 501 - -
Gma13g02408 501 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 9 37 448 - -
Gma13g02408 501 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 180 IPR027417 -
Gma13g02408 501 MobiDBLite consensus disorder prediction 477 501 - -
Gma13g02408 501 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 37 448 IPR039657 -
Gma13g02408 501 Pfam IPP transferase 80 369 - -
Gma13g02408 501 TIGRFAM miaA: tRNA dimethylallyltransferase 47 224 IPR018022 GO:0008033
Gma13g02408 501 Hamap tRNA dimethylallyltransferase [miaA]. 47 386 IPR018022 GO:0008033
Gma13g02408 501 Gene3D - 44 438 IPR027417 -
Gma13g02408 501 Gene3D - 155 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02408 Gma-Chr13 38822084 38831533 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02408 50 330 C2H2 Transcription Factor Family AT2G27760 25.260 1.98e-18 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02408 K00791 - gmx:100808814 914.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02408 13 38822084 38831533 Gma13g02408 13 38822084 38831533 ECH