Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02399 ATGGCTACCTTCTCCAAGGAACGCGAGAACTTTGTATACGTTGCCAAGTTAGCTGAACAAGCTGAACGCTATGATGAAATGGTGGATGCCATGAAGAAGGTGGCGAAGCTGGACGTTGAGTTGAGTGTGGAAGAGAGGAACCTGTTCTCTGTTGGGTACAAGAATGTGGTGGGGTCACGGAGAGCTTCATGGAGAATCTTGTCATCGATAGAGCAGAAAGAGGATTCCAAAGGGAATGAGTTGCATGTTAAGCATATCAGGGATTACAGGAACAAGGTGGAGTTGGAGCTGTCCAACATTTGCAGTGACATTATGATAATTTTAGATGAGCATCTTATTCCATCCACTAATATTGCGGAGTCCACAGTGTTTTATTATAAGATGAAAGGAGACTATTACCGGTATTTGGCAGAATTTAAAGCTGGCAATGAAAAGAAAGAGGTGGCAGATCAGTCACTTAAAGCATATCAGACAGCTTCTACCACTGCTGAGAGTGAACTACAACCTACACATCCTATTCGTTTGGGTCTGGCTCTAAATTTCTCAGTGTTTTATTATGAGATATTAAATTCACCTGAAAGGGCCTGCCATCTTGCAAAGCAAGCCTTTGATGATGCTGTCTCGGAGCTGGATACCCTGAATGAGGATTCTTACAAGGACAGTACCTTGATTATGCAGCTGTTGAGGGATAACCTTACTTTATGGACTTCTGATATCCCCGAAGAGGGTGAGGACCTAATAATGGAAAGCGCAGCCAGGGTTGATCAAGGAGAAGATGAGTTAGGCCGCTAA 792 0.4369 MATFSKERENFVYVAKLAEQAERYDEMVDAMKKVAKLDVELSVEERNLFSVGYKNVVGSRRASWRILSSIEQKEDSKGNELHVKHIRDYRNKVELELSNICSDIMIILDEHLIPSTNIAESTVFYYKMKGDYYRYLAEFKAGNEKKEVADQSLKAYQTASTTAESELQPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDDAVSELDTLNEDSYKDSTLIMQLLRDNLTLWTSDIPEEGEDLIMESAARVDQGEDELGR 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02399 263 ProSitePatterns 14-3-3 proteins signature 2. 218 237 IPR023409 -
Gma13g02399 263 SUPERFAMILY 14-3-3 protein 7 238 IPR036815 -
Gma13g02399 263 PIRSF 14-3-3 2 248 IPR000308 -
Gma13g02399 263 PANTHER 14-3-3 PROTEIN 3 263 IPR000308 -
Gma13g02399 263 SMART 1433_4 8 249 IPR023410 -
Gma13g02399 263 Pfam 14-3-3 protein 15 236 IPR023410 -
Gma13g02399 263 PANTHER GENERAL REGULATORY FACTOR 2 3 263 - -
Gma13g02399 263 Coils Coil 14 34 - -
Gma13g02399 263 PRINTS 14-3-3 protein zeta signature 40 69 IPR000308 -
Gma13g02399 263 PRINTS 14-3-3 protein zeta signature 89 113 IPR000308 -
Gma13g02399 263 PRINTS 14-3-3 protein zeta signature 120 142 IPR000308 -
Gma13g02399 263 PRINTS 14-3-3 protein zeta signature 155 181 IPR000308 -
Gma13g02399 263 PRINTS 14-3-3 protein zeta signature 182 208 IPR000308 -
Gma13g02399 263 PRINTS 14-3-3 protein zeta signature 209 238 IPR000308 -
Gma13g02399 263 Gene3D - 2 249 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02399 Gma-Chr13 38745352 38749244 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02399 5 245 14-3-3 family AT2G42590 78.838 1.31e-144 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02399 K06630 - gmx:100806167 515.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02152 12 42390591 42394339 Gma13g02399 13 38745352 38749244 ECH
Gma13g02399 13 38745352 38749244 Gma13g02399 13 38745352 38749244 ECH