Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02360 ATGCCAATCAGCATGAAGACCATCATTTCCTCTCAATTTGTCCTCCTTTCACTCCTTCCAATTTGCTTCACATGGCTTGCTTTTGGAGCCAACAAACTGCCACAAAATGAGGTGGATGCGCTGAAGGAGATAGCTAAAACACTTGGTAAGGAGAATTGGGACTTCAGTGTAAATCCATGCTACAGCTGGAATCTTTCCAAAGACAATATGGTTTCTTGCAATTGCGATATTTCTAATGACAGTTTCTGCCATGTCATGAAAATAGCTCTGAAATCACAAAATCTTCGAGGCAATCTTCCCCCACAACTGATCGAATTACCTTATCTCCAAGAGATTGAACTCAGCCGTAACTACCTTAGTGGTACAATTCCTAGACAATGGGGCTCCTCCAACCTTCAAAAAATTTCTCTTCTTGGAAACCGAATAACTGGCCCAATCCCAAAAGAGCTGGGAAAACTCACCAATCTTACACGCTTGATCCTTGAGTTCAATCAACTCTCTGGAAAGCTTCCTTCAGAACTTGGGAATCTTGTCCTCATTAAACAACTACATCTAAGCTCCAATAACTTCACTGGTCCATTGCCAGCAACTCTTGCGAGGCTTACTACAATGGATGAATTTCGAATTAATGACAACCAGTTTTCTGGCAACATACCTGATTTTATTGGAAGTTGGAAAAGTCTTGATCAACTACATATGCAAGGGAGTGGTTTAAGtggaccaattccttcgggaatttcacttctaaacttaactgatttGAGGATTAGTGACTTAAATGGACCTGATTCAACTTTTCCACGACTAGAAAATATGACATATCTGAAATATTTGATATTAAGGAGTTGCAATATCAATGACACATTTCCTCAGTATCTTGTAAGGCTATCACGTTTGCAAATTTTAGACCTCAGCTATAACAAATTAAATGGACCAGTCCCGAAAAACCTTCAAGAAGTAGCATTAGCAAGCTACATATATTTAACTGGAAACTTCCTCACTGGACTGGTACCTGAGTGGACAAGTGCCAATAATAAAAATTTAGATCTTTCATATAACAACTTCAGTGTTGAAGACCGAGAGTCAAAGATATGTTACCAGAAAACTGCGAACTTGTTTGGAAGCTTTTCAAGGACTAACTTAGGACCAGTTTCTTGTGAGAACAGCACTAGAACCTGTACTAAGAATGTTCAATCTCTATATATAAATTGTGGTGGAAAGCAGGTTGTTGTTGGAGGTATAACATATGATGAAGATATGGATTCAGCTGGACCAGCAGTGTATAAACAGAGTAGAAACAACTGGGCATTTAGCAACACAGGTCAATTCATGGACAATAATACTTTAGCTATACAAGGAAAGCTTCCCGCCTATACCACAGAAAATGAAACCAGGCTTTATATGACGGATGCCGAATTATATAAGAATGCGCGTATTTCCCCCATGTCTTTGACTTATTATGGATTTTGCTTGGAAAATGGAGACTACACAGTAAAGCTTCACTTTGCTGAGATAATGTTTACAGCTGATAGCACATATAGCTGCTTAGGGAGGCGTCTATTTGATGTATATATTCAGGGAAGGCGAGTACTGAAGGATTTCAACATTGCTAATGAAGCACAAGGAGTTGGAAAGGAACTCATAAAAGAATTTCCTGCTCATGTGAGTACTAATGACTTAGAGATCCGCTTCTATTGGGCAGGCAAAGGGACAACAAATATCCCGTATAAATCAGTATATGGTCCTCTTATATCCGCTATTTCTGTCAAGTATGCTCAGTATGACTCTACAGGTGACATGTCTGCAGGAGTTATTGTTGCAATTGTAGCTGCATTAGTGATTGTTGTCATCTTGATTGTTCTTGGCATACTTTGGTGGATGGGTTTCATTGGTGATTGTTGTTGGAATGCTTCGGTGGAAGGGTTATTGTCAACGTCAAACTTCCTGCCTCATTTTGGTCGAAAGAAACATTTATTAATGAAAGAGCTCAGAGATCTAGATCTACAAACTGGTGTATTTACCTTACATCAAATCAAAGTTGCAACAAATAACTTTGATATTTCCAATAAGATTGGAGAAGGAGGCTTTGGTCCTgtttataagggcattctgtcaaacagcaaaccaatagcagtcaaacaactatcacctaaatcagagcaaggaacccgtgagtttataaatgagataggcatgatctctgctttgcaacaccctaatcttgttaaactttatggctgttgtgttgagggagatcaattgttgctagtatacgaatatatggaaaacaatagccttgcacatgcgttatttgACTCAGGAGATAGACATTTGAAATTGAGTTGGCCAACAAGGAAGAAGATTTGTGTtggtattgctagaggtttagctttcatgcatgaagaatcaagactaaaagttgttcacagggatttaaagacctctaatgtgttgcttgatgaagacctaaacccaaagatatctgattttggtttggccaggcttcgtgagggagacaatactcacataagcaccagaattgcagggacttggggatatatggctcctgagtatgcaatgcatggttatctgaccgaaaaggcagatgtttatagttttggggttattaccatagaaattgtaagtggaaaaagaaacaCTATTCACCAATCAAAGGAGGAAGCATTTTATCTTCTTGATTGGGCACGTTTGTTGAAAGACAGAGGTAGCATAATGGAGCTAGTTGATCCAAGGTTGGGTATAGATTTCAATGAAGAGGAGGTAATGTTGATGGTCAAAGTGGCTCTCCTatgcaccaatgtcacttcaacccttaggccctccatgtctactgtgctaaacatgcttgagggcagaacggtagttccagaatttgttgCACTGTCAAGTGAGGTATTGGATGAGATGAAGTTGGGGATAATGAGAGAGTTTTACAGTCAAATGGAAGAAAATAACACAAGTGAGGCACGAAGTTTGAGCTTGACAATGGATGTTCCATGGACTTGTTCATCTTCATCAGCTGTAGATCTCAATCCGGCTCACCTTGATGCTTCCTGTTGGGAGAAAAAGAAATTAAGAGAGTCTGTATGA 3111 0.3118 MPISMKTIISSQFVLLSLLPICFTWLAFGANKLPQNEVDALKEIAKTLGKENWDFSVNPCYSWNLSKDNMVSCNCDISNDSFCHVMKIALKSQNLRGNLPPQLIELPYLQEIELSRNYLSGTIPRQWGSSNLQKISLLGNRITGPIPKELGKLTNLTRLILEFNQLSGKLPSELGNLVLIKQLHLSSNNFTGPLPATLARLTTMDEFRINDNQFSGNIPDFIGSWKSLDQLHMQGSGLSGPIPSGISLLNLTDLRISDLNGPDSTFPRLENMTYLKYLILRSCNINDTFPQYLVRLSRLQILDLSYNKLNGPVPKNLQEVALASYIYLTGNFLTGLVPEWTSANNKNLDLSYNNFSVEDRESKICYQKTANLFGSFSRTNLGPVSCENSTRTCTKNVQSLYINCGGKQVVVGGITYDEDMDSAGPAVYKQSRNNWAFSNTGQFMDNNTLAIQGKLPAYTTENETRLYMTDAELYKNARISPMSLTYYGFCLENGDYTVKLHFAEIMFTADSTYSCLGRRLFDVYIQGRRVLKDFNIANEAQGVGKELIKEFPAHVSTNDLEIRFYWAGKGTTNIPYKSVYGPLISAISVKYAQYDSTGDMSAGVIVAIVAALVIVVILIVLGILWWMGFIGDCCWNASVEGLLSTSNFLPHFGRKKHLLMKELRDLDLQTGVFTLHQIKVATNNFDISNKIGEGGFGPVYKGILSNSKPIAVKQLSPKSEQGTREFINEIGMISALQHPNLVKLYGCCVEGDQLLLVYEYMENNSLAHALFDSGDRHLKLSWPTRKKICVGIARGLAFMHEESRLKVVHRDLKTSNVLLDEDLNPKISDFGLARLREGDNTHISTRIAGTWGYMAPEYAMHGYLTEKADVYSFGVITIEIVSGKRNTIHQSKEEAFYLLDWARLLKDRGSIMELVDPRLGIDFNEEEVMLMVKVALLCTNVTSTLRPSMSTVLNMLEGRTVVPEFVALSSEVLDEMKLGIMREFYSQMEENNTSEARSLSLTMDVPWTCSSSSAVDLNPAHLDASCWEKKKLRESV 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02360 1036 Gene3D Ribonuclease Inhibitor 35 197 IPR032675 -
Gma13g02360 1036 SUPERFAMILY L domain-like 73 312 - -
Gma13g02360 1036 CDD STKc_IRAK 691 958 - -
Gma13g02360 1036 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 382 992 - -
Gma13g02360 1036 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 280 356 - -
Gma13g02360 1036 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 77 286 - -
Gma13g02360 1036 SMART serkin_6 685 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02360 1036 SUPERFAMILY Protein kinase-like (PK-like) 668 966 IPR011009 -
Gma13g02360 1036 ProSitePatterns Serine/Threonine protein kinases active-site signature. 807 819 IPR008271 GO:0004672|GO:0006468
Gma13g02360 1036 Pfam Malectin domain 400 587 IPR021720 -
Gma13g02360 1036 Gene3D Phosphorylase Kinase; domain 1 652 760 - -
Gma13g02360 1036 Gene3D Transferase(Phosphotransferase) domain 1 761 967 - -
Gma13g02360 1036 Gene3D Ribonuclease Inhibitor 201 372 IPR032675 -
Gma13g02360 1036 PANTHER PUTATIVE-RELATED 280 356 - -
Gma13g02360 1036 PANTHER PUTATIVE-RELATED 382 992 - -
Gma13g02360 1036 PANTHER PUTATIVE-RELATED 77 286 - -
Gma13g02360 1036 Pfam Protein kinase domain 687 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02360 1036 Gene3D - 398 593 - -
Gma13g02360 1036 ProSiteProfiles Protein kinase domain profile. 685 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02360 Gma-Chr13 38347067 38359867 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02360 33 1016 Receptor kinase-like Gene Family AT1G53420 49.648 0.0 943
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma13g02360 Pkinase 5.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02360 - - gmx:100791136 2048.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02360 13 38347067 38359867 Gma13g02360 13 38347067 38359867 ECH