Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02350 ATGGTTGGATTCCAGAGTGACCATAAGCCCGGGAACAAGTGCAATGGTAATTCTAATAGTTTTCCGGTTCCGGATCGTCATGTACGACTTATGAGAGGAAGAGAGCTAAGAAAAAGCAGCAAGGCATCTCCTGATAGTAATAATATTAGTAATGTGGTTAGTGAATATTCTGAGCATAACCTGCGCTTAAGAGAAGATAATAGTAACTCTGCTGCTCCCTTTGAACGATACCTGGAAGGAGTGGCAGCAGCAGCAGCAGCAGCACGGGGCGCAAGGGAAGATGGGAGACCTTTCAGACAACGGCTTTTGGTGGTGGCCAATAGGCTGCCAGTCTCAGCAATAAGGAAAGGCGAGGATTTGTGGTCTTTGGAGATAAGTGCTGGTGGCCTGGTGAGCGCTCTCTTAGGTGTGAAGGAGTTTGAGGTGAGGTGGATAGGTTGGGCTGGGGTCAATGTGCCCGATGAGATTGGACAAAAGGCACTTACAAAAGCTTTGGCCGAAAAGAGGTGCATTCCAGTATTTCTTGATGAAGAGATTGTTCATCAATATTACAATGGCTATTGCAACAACATTCTGTGGCCCCTTTTTCATTACCTTGGACTTCCACAAGAAGACCGCCTTGCTACCACCCGGAGTTTCCAATCTCAGTTTGAAGCATATCAGAAAGCAAATCAAATGTTTGCTGCTGTTGTAAACAAACACTATGAAGAGGGTGATGTTGTTTGGTGCCATGATTACCATCTTATGTTTCTTCCACAATGCTTAAAGAATTATAACCGCAAAATGAAAGTTGGCTGGTTTCTGCATACCCCGTTTCCATCTTCTGAAATTCACAGGACATTGCCATCTCGCTCAGAGCTCTTGCATGCTGTTCTTGCAGCTGATTTGGTTGGTTTTCACACCTACGACTATGCACGACATTTTGTTAGTGCATGTACACGCATTCTTGGACTTGAGGGCACACCTGAAGGGGTTGAGAATCAGGGGAAGCTGACTCGAGTTGCAGCATTTCCAATAGGTATAGACTCAGAACGATTCATACGTGCGCTTGACCTTCCTCAAGTGAAGGAACACATCAAAGAATTACAAGAGAGATTTAAAGGAAGAAAGGTAATGTTAGGTGTTGATCGCCTTGATATGATTAAAGGAATCCCTCAAAAAATTCTAGCATTTGAAAAATTTTTGGAAGAGAATCGTGATTGGCGTGATAAAGTTGTTCTGCTTCAAATTGCTGTGCCGACAAGAACAGATGTTCCTGAGTATCAAAAGCTTACTAGCCAGGTCCATGAAATTGTTGGTCGCATCAATGGCAGATTTGGAGAACTGACTACTGTTCCCATACATCACCTGGATCGCTCTCTTGATTTTCATGCACTATGTGCTTTGTATGCTGTTACGGATGTAGCACTTGTCACATCTTTGAGGGATGGAATGAATCTTGTAAGTTATGAATTTGTGGCCTGCCAAGATAAAAAGAAAGGGGTTCTCATTCTCAGCGAATTTGCTGGTGCTGCACAGTCACTTGGTGCTGGGGCTATTCTGGTCAACCCTTGGAACATCACAGAAGTTGCTACTGCAATTGCCAAGGCTCTGAATATGCCATCGGCAGAACGAGAGAAGAGACATAAGCATAACTATGAACATGTAAAAACTCACACTGCTCAGGAATGGGCAGAAACTTTTGTAAGTGAACTAAATGATACTGTTGTCGAGGCACAGATAAGGACAAAACAAGTTCCACCACGGCTCCCAACAGAGACTGCAGTTGAACGTTATTTGCAGTCAAATAATCGGTTGCTTATTTTGGGTTTCAATGGAACTTTAACTGAACCAGTTGAGAGAGAAGGTGATCGGTTTAAAGAAAGGGAACTCACTGTGCATCCAGAACTGAAACTGCCCTTGGCAGAATTATGCAGTGACCCAAAGACCACAGTTGTTGTGCTTAGTGGAAGTGGTAGAGCAGTTCTAGATGAAAACTTCAAAGAATATGACATCTGGCTGGCAGCAGAGAATGGGATGTTTTTAAACCCTTCAAAGGGAGAATGGATGACAACAATGCCAGAGCAACTGAATATGGAATGGGTTGACAGTGTGAAGCATGTTTTTGATTACTTCACGGACAGAACACCTCGATCATATTTTGAAGAAAGGGAAGCTTCACTTGTATGGAGTTACAGACATGCAGATGCTGAGTTTGGAAGATTGCAAGCGAGGGACATGCTGCAGCATCTCTGGACAGGTCCAATTTCTAATGCATCTGTTGACGTTGTTCAAGGGAGCCGATCTGTTGAGGTGCGAGCTGCTAATGTTACAAAGGGAGCAGCTATTGACCGCATTCTAGGTGAGATAGTCCACAGTAAATTCATGACAACACCAATTGATTACGTTCTGTGTATAGGACATTTTCTGACAAAGCAGGATGAAGATATATACGCCTTTTTTGAGCCAGAGCTACCTTCAATAGGTGTGGGTCTTCAAAGAAGCAAGGGAACAGAAGGAGTAAAGTTTCCAGTTGAGAGGGTATCGTCATTGAAGAACCCAGCAAGTAGAAATGGAGCAGCAAAGTCGTCATCCCAAAAAAAGGGACAACGCCCTGTGTCAAATAATGAGAAGAAAAGAAACAATCATGTCTGCCGCGGGCCACGTCGGCTGGCTCCCGAAAAGATATCTTGGAATGTCCTTGACCTGAAGAAGGAGAATTACTTCTCGTGTGCCGTTGGACGAACACAGACCAATGCTCGGTATACGCTTGGATCACCAGATGAAGTTGTTGCATTTCTCAAGGAACTAGCCAATGTCTGA 2802 0.4397 MVGFQSDHKPGNKCNGNSNSFPVPDRHVRLMRGRELRKSSKASPDSNNISNVVSEYSEHNLRLREDNSNSAAPFERYLEGVAAAAAAARGAREDGRPFRQRLLVVANRLPVSAIRKGEDLWSLEISAGGLVSALLGVKEFEVRWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFEAYQKANQMFAAVVNKHYEEGDVVWCHDYHLMFLPQCLKNYNRKMKVGWFLHTPFPSSEIHRTLPSRSELLHAVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVENQGKLTRVAAFPIGIDSERFIRALDLPQVKEHIKELQERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEENRDWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGELTTVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQDKKKGVLILSEFAGAAQSLGAGAILVNPWNITEVATAIAKALNMPSAEREKRHKHNYEHVKTHTAQEWAETFVSELNDTVVEAQIRTKQVPPRLPTETAVERYLQSNNRLLILGFNGTLTEPVEREGDRFKERELTVHPELKLPLAELCSDPKTTVVVLSGSGRAVLDENFKEYDIWLAAENGMFLNPSKGEWMTTMPEQLNMEWVDSVKHVFDYFTDRTPRSYFEEREASLVWSYRHADAEFGRLQARDMLQHLWTGPISNASVDVVQGSRSVEVRAANVTKGAAIDRILGEIVHSKFMTTPIDYVLCIGHFLTKQDEDIYAFFEPELPSIGVGLQRSKGTEGVKFPVERVSSLKNPASRNGAAKSSSQKKGQRPVSNNEKKRNNHVCRGPRRLAPEKISWNVLDLKKENYFSCAVGRTQTNARYTLGSPDEVVAFLKELANV 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02350 933 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 100 569 - -
Gma13g02350 933 Pfam Glycosyltransferase family 20 101 566 IPR001830 GO:0003824|GO:0005992
Gma13g02350 933 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 101 566 IPR012766 GO:0003825|GO:0005992
Gma13g02350 933 Gene3D Glycogen Phosphorylase B; 93 347 - -
Gma13g02350 933 Gene3D - 601 829 IPR023214 -
Gma13g02350 933 CDD HAD_TPP 599 824 - -
Gma13g02350 933 SUPERFAMILY HAD-like 598 931 IPR036412 -
Gma13g02350 933 MobiDBLite consensus disorder prediction 1 26 - -
Gma13g02350 933 CDD GT20_TPS 101 566 IPR001830 GO:0003824|GO:0005992
Gma13g02350 933 Gene3D - 688 768 - -
Gma13g02350 933 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 26 931 - -
Gma13g02350 933 TIGRFAM T6PP: trehalose-phosphatase 597 824 IPR003337 GO:0003824|GO:0005992
Gma13g02350 933 Gene3D Glycogen Phosphorylase B; 348 551 - -
Gma13g02350 933 Pfam Trehalose-phosphatase 604 829 IPR003337 GO:0003824|GO:0005992
Gma13g02350 933 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 26 931 IPR001830 GO:0003824|GO:0005992
Gma13g02350 933 MobiDBLite consensus disorder prediction 844 864 - -
Gma13g02350 933 MobiDBLite consensus disorder prediction 839 881 - -
Gma13g02350 933 MobiDBLite consensus disorder prediction 865 881 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02350 Gma-Chr13 38228466 38239897 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02350 10 933 Trehalose Biosynthesis Gene Families AT1G78580 75.527 0.0 1437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02350 K16055 - gmx:100789554 1868.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02187 12 42910383 42921666 Gma13g02350 13 38228466 38239897 ECH
Gma13g02350 13 38228466 38239897 Gma13g02350 13 38228466 38239897 ECH