Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02341 ATGCAGCAAGATCAGCTCAAGAAGGATATTAAGGAGGTAGAGTTTTTCACTGAGTACGGGGATGCCAACAGATACAAGATTCTTGAAGTGGTTGGGAAGGGTAGCTATGGAGTTGTTTGTTCTGCAATTGATACACACACTGGAGGAAAGGTTGCAATAAAGAAGATTCATGATATTTTTGAACATATCTCTGATGCCATCAGAATCCTCAGGGAAGTCAAGTTGCTAAGACTTTTAAGACACCCTGATATTGTTGAGATTAAGCGGATCGTGTTGCCGCCTTCAAAGAGGGAGTTTAAAGATATTTATGTAGTCTTTGAGCTCATGGAGTCTGATCTCCATCAGGTCATTAAAGCTAATGACGACTTGACTCGCGAACACTATCAGTTTTTTCTTTATCAGATGCTACGTGCATTGAAGTATATGCATACAGCTAATGTATATCACAGAGACCTTAAGCCCAAGAATATACTGGCAAATGCAAACTGCAAACTCAAAGTTTGTGACTTTGGATTGGCAAGAGTTGCATTCAGTGATGCCCCAACAACAACTTTTTGGACGGATTATGTTGCTACAAGATGGTACAGAGCCCCAGAACTATGTGGCTCCTTCTTTTCAAAGTACACACCAGCAATTGATGTATGGAGCATTGGATGCATTTTTGCAGAGGTGTTGACAGGAAAACCACTGTTTCCTGGTAAAAGTGTCGTGCATCAATTAGATTTGATTACTGATCTTCTCGGGACACCATCACCTGAAACTATTGCAGGAGTTCGAAATGACAAGGCAAGGAAGTACTTGATGGAAATGCGGAAGAAATCTCCTGTGCCATTTGAACAGAAATTTCAGAATGCAGATCCATTGGCACTTCGCCTATTACAAAGGCTTTTAGCATTTGATCCAAAGGATCGACCAACTGCTCAAGAGGCACTGGCTGATCCCTTCTTTAAGGGTTTGTCCAAAGTTGAGAGAGAACCTTCTTGTCAGCCAATTTCAAAATTAGAATTTGAGTTTGAGAGGAGACGAGTGACAAAAGATGATGTTAGGGAACTAATATATCGGGAAATACTGGAATATCATCCCCAGTTGCTTAAAGATTACATGAATGGAACTGAAGGCACTCACTTCCTTTACCCTAGTGCAGTAGATCAATTCAGAAAGCACTTTGCTTATCTTGAGGAAAATCATGGTAAAAGTGGCCCAGTGATTCCTCCAGAAAGGAAGCATGTCTCCCTTCCAAGGTCCATTGTTCACTCTAGTACAATTCCTCCTAGTTCACAACCATCTTTTACTTCATACGAGAACAAGCAAATGGCATTAGAGGCATCAAAGGTTTCGAGATCAGTAGAATCAAATTCCAGAAGTCAATTAAGGAGCTCGCGACCTCCGCCAAGAGTGCCAGCAGCCAAAGCAGGTCGAATCACAGGGCCAGTTTTGCACTATGACAATGGGAGAACCATAAAAGACGCTTATGACCAAAGGGTCGCTTCCTCAATTCGTCTCTCCACATTGTTTCCATAG 1521 0.4181 MQQDQLKKDIKEVEFFTEYGDANRYKILEVVGKGSYGVVCSAIDTHTGGKVAIKKIHDIFEHISDAIRILREVKLLRLLRHPDIVEIKRIVLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDAPTTTFWTDYVATRWYRAPELCGSFFSKYTPAIDVWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAGVRNDKARKYLMEMRKKSPVPFEQKFQNADPLALRLLQRLLAFDPKDRPTAQEALADPFFKGLSKVEREPSCQPISKLEFEFERRRVTKDDVRELIYREILEYHPQLLKDYMNGTEGTHFLYPSAVDQFRKHFAYLEENHGKSGPVIPPERKHVSLPRSIVHSSTIPPSSQPSFTSYENKQMALEASKVSRSVESNSRSQLRSSRPPPRVPAAKAGRITGPVLHYDNGRTIKDAYDQRVASSIRLSTLFP 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02341 506 MobiDBLite consensus disorder prediction 441 471 - -
Gma13g02341 506 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02341 506 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Gma13g02341 506 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02341 506 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Gma13g02341 506 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Gma13g02341 506 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02341 506 SUPERFAMILY Protein kinase-like (PK-like) 20 320 IPR011009 -
Gma13g02341 506 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 10 466 - -
Gma13g02341 506 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 19 10 466 - -
Gma13g02341 506 MobiDBLite consensus disorder prediction 441 460 - -
Gma13g02341 506 CDD STKc_TDY_MAPK 24 361 - -
Gma13g02341 506 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02341 Gma-Chr13 38155415 38159302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02341 1 498 MAP Kinase Gene Family AT1G53510 77.490 0.0 792
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Gma13g02341 Pkinase 7.8e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02341 - K04371 gmx:100800878 933.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02341 13 38155415 38159302 Gma13g02341 13 38155415 38159302 ECH