Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02336 ATGGCCATAGGAATCGACCTTGGCACAACTTACTCGTGTGTTGCAGTATGGCGGGACCAGTACTATCGAGTGGAGATCATCCACAATGACCAAGGCAACAACACTAATCCCTCCTGTGTTGCTTTCACTGACCATGATAGGTTGATTGGAGATGCAGCTAAAAATCAAGCTGCGTCCAATCCAGCAAACACTGTTTTTGGTGTATTTTTCTACTCTTAA 219 0.4475 MAIGIDLGTTYSCVAVWRDQYYRVEIIHNDQGNNTNPSCVAFTDHDRLIGDAAKNQAASNPANTVFGVFFYS 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02336 72 PRINTS 70kDa heat shock protein signature 31 43 - -
Gma13g02336 72 PRINTS 70kDa heat shock protein signature 53 61 - -
Gma13g02336 72 PRINTS 70kDa heat shock protein signature 1 14 - -
Gma13g02336 72 PANTHER HEAT SHOCK PROTEIN 70KDA 1 67 IPR013126 GO:0005524|GO:0140662
Gma13g02336 72 PANTHER HEAT SHOCK 70 KDA PROTEIN 1 67 - -
Gma13g02336 72 Pfam Hsp70 protein 2 68 IPR013126 GO:0005524|GO:0140662
Gma13g02336 72 ProSitePatterns Heat shock hsp70 proteins family signature 1. 5 12 IPR018181 -
Gma13g02336 72 Gene3D - 1 69 - -
Gma13g02336 72 SUPERFAMILY Actin-like ATPase domain 1 68 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02336 Gma-Chr13 38109007 38109225 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02336 2 66 Calmodulin-binding Proteins AT5G02500 78.462 4.19e-29 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02336 K03283 - gmx:102667572 120.553