Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02330 ATGAAGAATTCCCTGGTTATAGCCTTTTCCATAACCATATGCTCCATCGCTTTTGTGATATCAAAGATTGTTATCTCAGTCCTCCTCTACAAAAGATGGAGAAGAAAACATTTGATTCATGAAGAAGGTTATCCAGGAGGGAAGATAGTAATATTTAGGTCCTCAGGGCTTAAATCTCTCAAAGCTGATGTGATCTTAAAGAAGACACAGAAACTAAACAGCAAGGACATCATTGGATCAGGTGGTTATGGTGTGAGAGAGATAAAGGTTTTGAGAGAGTTGGAAGCAATGGCAGACATAAAGCACCGCAACATTGTGACACTTCATGGATATTACTCTGCACCACACTACAATCTTCTCATATATGAGCTAATGCCCCATGGAAGTTTGGATTCCTTTTTGCATGGGAGATCAAGGGAGAAGAAGGTTTTGGATTGGCCAACCAGATATAGAATAGCTGCAGGTGCAGCTAGAGGAATATCATATCTTCACCATGATTGCATCCCTCACATTATCCACAGAGACATAAAGTCAAGTAACATATTGTTGGATCGAAATATGGATGCTCGGGTTTCTGATTTTGGATTAGCAACGTTGATGCAACCAACTAAAACTCATGTGTCAACAATTGTAGCTGGAACTTTTGGATACTTGGCACCTGAATATTTTGATACAGGAAGAGCAACACTGCAAGGGGATGTTTACAGCTTTGGAGTTGTTTTGCTGGAGCTTTTAACTGGGAAAAAACCCAGTGATGAAGCATTTATGGAAGAGGGAACCATGCTTGTCACATGGGTGAAGGCTGTTGTTCGAGACAAGAAAGAGGAGTTAGTTCTTGATAATAGCCTAGGGTCTTGTTCAATGCAAGAGGTCAACAAGGTGTTCAGCATTGCAATGATGTGTCTTGAACCGGATCCCTTGAAGAGGCCAACCATGGCCGAAGTTGTCTCTTTGCTTGAGCAAACAGAAGCAGATAAACTCATTACTGCATCCTGA 996 0.4127 MKNSLVIAFSITICSIAFVISKIVISVLLYKRWRRKHLIHEEGYPGGKIVIFRSSGLKSLKADVILKKTQKLNSKDIIGSGGYGVREIKVLRELEAMADIKHRNIVTLHGYYSAPHYNLLIYELMPHGSLDSFLHGRSREKKVLDWPTRYRIAAGAARGISYLHHDCIPHIIHRDIKSSNILLDRNMDARVSDFGLATLMQPTKTHVSTIVAGTFGYLAPEYFDTGRATLQGDVYSFGVVLLELLTGKKPSDEAFMEEGTMLVTWVKAVVRDKKEELVLDNSLGSCSMQEVNKVFSIAMMCLEPDPLKRPTMAEVVSLLEQTEADKLITAS 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02330 331 ProSiteProfiles Protein kinase domain profile. 33 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02330 331 Gene3D Phosphorylase Kinase; domain 1 55 128 - -
Gma13g02330 331 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 90 324 - -
Gma13g02330 331 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 85 - -
Gma13g02330 331 PANTHER BNAA07G39120D PROTEIN 90 324 - -
Gma13g02330 331 Gene3D Transferase(Phosphotransferase) domain 1 129 329 - -
Gma13g02330 331 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Gma13g02330 331 SMART serkin_6 72 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02330 331 PANTHER BNAA07G39120D PROTEIN 1 85 - -
Gma13g02330 331 SUPERFAMILY Protein kinase-like (PK-like) 55 321 IPR011009 -
Gma13g02330 331 Pfam Protein kinase domain 86 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02330 Gma-Chr13 38075326 38077358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02330 5 321 Receptor kinase-like Gene Family AT2G35620 43.149 1.47e-85 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Gma13g02330 Pkinase 4.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02330 - - ahf:112703495 512.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02330 13 38075326 38077358 Gma13g02330 13 38075326 38077358 ECH