Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02326 atgagaTTTGTAGGTTACATAGCGCAATGGAGAAGCGCAGCGAAGGAGGCGTTGGATCGCACAGCCATCACTGTGAAATTCCTGTGCTGGCTTCACTTCACCGGCAACTACCTCTGTTCCCCATGTCACACCTATGGGGTTAGCATGCTCCCCACCCTCAACGTCGCCGGCGACGTTCTTCTCGCCGACCACCTCTCGCCGCGGCTCGGGAACATCGGCCACGGAGACTTGGTGCTTGTTCGGTCCCCTCTGAACCCTAAGATAAGGCTGACGAAGCGCGTCGTCGCTGTGGAAGGGGACACCGTCACCTACTTCGACCCTTTGCACTCTGAGGCTGCTCAAGTTGCAGTGGTGCCAAAGGGACATGTTTGGATTCAAGGGGATAACATTTATGCTTCCCGTGATTCACGGCATTTTGGTCCTGTTCCATATGGTCTTATAGAAGGAAAAGTGTTTTTCCGGGTATGGCCACCTGATAGCTTTGGACCACTAGGCCGTTGA 501 0.5389 MRFVGYIAQWRSAAKEALDRTAITVKFLCWLHFTGNYLCSPCHTYGVSMLPTLNVAGDVLLADHLSPRLGNIGHGDLVLVRSPLNPKIRLTKRVVAVEGDTVTYFDPLHSEAAQVAVVPKGHVWIQGDNIYASRDSRHFGPVPYGLIEGKVFFRVWPPDSFGPLGR 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02326 166 Pfam Signal peptidase, peptidase S26 114 156 IPR019533 GO:0004252|GO:0006465
Gma13g02326 166 Pfam Signal peptidase, peptidase S26 26 105 IPR019533 GO:0004252|GO:0006465
Gma13g02326 166 Gene3D Umud Fragment, subunit A 35 162 - -
Gma13g02326 166 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 8 162 - -
Gma13g02326 166 SUPERFAMILY LexA/Signal peptidase 37 164 IPR036286 -
Gma13g02326 166 CDD S26_SPase_I 46 151 IPR019533 GO:0004252|GO:0006465
Gma13g02326 166 PRINTS Bacterial leader peptidase 1 (S26A) family signature 37 53 IPR000223 GO:0006508|GO:0008236|GO:0016020
Gma13g02326 166 PRINTS Bacterial leader peptidase 1 (S26A) family signature 90 102 IPR000223 GO:0006508|GO:0008236|GO:0016020
Gma13g02326 166 PRINTS Bacterial leader peptidase 1 (S26A) family signature 118 137 IPR000223 GO:0006508|GO:0008236|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02326 Gma-Chr13 38038490 38042661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02326 49 165 MADS-box Gene Family AT1G29960 52.542 2.38e-39 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02326 K09647 - gmx:100527597 246.514