Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02293 ATGGATGGTCAGGGTCACGGAGGAGGGAGCAGAGCAGAAGCGGAGAGATGGCTTTACACAGCGAACAAGGTTTTAAGCGCACGTGACCTGCACGGGGCCCGCTCATTCGCGATCCGGGCCCGAGAGTCCGACCCGAGATACGAGCCCACGGAGCTCCTTCTAACGGTCATTGATACACTCATGGCCGGCGAGGCCCGGATCAACGACCACTTCGACTGGTACGCCATCCTCCAAGTCCTCCGTTATACTCAGAACATCGACTACATCACTGCCCAGTACCGCCGCCTCGCCACCCAACTCGACCCTCACCACAACCCCTTCGCTTTCGCCTCTCACGCCTTCACTCTCGTCAACGACGCGTGGTCCGTACTCTCCAACCCAACCAAAAAGGCTTTCTACGACAACCAACTCAGACTCCTCACTCAACCCGCTCCTCCTCCTCAACCACCACCGCCGCCACCTCTCGCTTCTCCTGCCCCGGTGGCCTTCTTTCCGATTCAGCCGCCGCAACCGAACCTAAACCCGAACCAATTCCCTCAAAGGGAAAGCCCTAGGCCTAGAGTAGAGGTGGAGCCTCCACCGCCGCCGCCGAGTCAGGTGGACAATGCGACCGAATTGACTCGGGCGAGTGACGTCGAGACCGAAGGGGTGAGTTTCTGGACCGCATGCCCTTACTGTTACGTTATGTACGAGTATCCGAAGGTGTACGAGGATTGTACTTTGCGGTGCCAGAATTGTCGGAGGGGGTTTCATGGGGTGGTTGTACCGTCGCCGTCGAAAGATGGTACTTTTGGCTCATTTTGCAGTTGGGGTTTTTTCCCTGTGGGGTTTTCCGGGGATTTCAAGGACATTAACGGGTCTTCTTCCAAGTGGAACCCTTTTTCCCCTTTGTTTCCTTGCGCTTTGCAGGGGGGTGAGGAGAATGGTAGGTACCAGAAGGGGCCTTGGGTTTTTTACGATGACGACGAGTCTGCGGAGTTCGTGGAGGGTGGTTCCGACACGACGGAGGATGATTCCGATGATGATGACTGGCGTGGCGGGAATCAGAAGGGGACCACGAGGAAAAGGAAAAGAAGGAAGAAGAGTAGCAATGTTGGTGGTGGTGGTGATGTTAGAAGGGTACCTACTACAATTGAGAGGCCTAGAAGAGGGGTTCAGAATAGTGATGGTAATGACAATGTGGAGAATGGTGAGGCTGTGGATGGTGGTGCTGGTGGTGCTATTGCGGTGGTGGTGCCGGAATCTAGCAAGAAGGCGGTGGCATTGGGTGGATCAAGGAGGAGGAGTGAGAGGAATTTGGGGAAGTTGGATTTGAATGTGGAGTTTAGCAATGAGGTGGAGGAGCCTATGTATGGCCCGGGTGAAGGGAATGTGAATGGGAATGCTGAGGATAATATTGAAGGGATTGGGTTTTTTGAGGGGCTGGATGAGTTCCTTAGTAGCTTGCCTATTCTCAATGTTGTTGCTGATGATAAGGTTAAGGGTCATTAG 1491 0.5439 MDGQGHGGGSRAEAERWLYTANKVLSARDLHGARSFAIRARESDPRYEPTELLLTVIDTLMAGEARINDHFDWYAILQVLRYTQNIDYITAQYRRLATQLDPHHNPFAFASHAFTLVNDAWSVLSNPTKKAFYDNQLRLLTQPAPPPQPPPPPPLASPAPVAFFPIQPPQPNLNPNQFPQRESPRPRVEVEPPPPPPSQVDNATELTRASDVETEGVSFWTACPYCYVMYEYPKVYEDCTLRCQNCRRGFHGVVVPSPSKDGTFGSFCSWGFFPVGFSGDFKDINGSSSKWNPFSPLFPCALQGGEENGRYQKGPWVFYDDDESAEFVEGGSDTTEDDSDDDDWRGGNQKGTTRKRKRRKKSSNVGGGGDVRRVPTTIERPRRGVQNSDGNDNVENGEAVDGGAGGAIAVVVPESSKKAVALGGSRRRSERNLGKLDLNVEFSNEVEEPMYGPGEGNVNGNAEDNIEGIGFFEGLDEFLSSLPILNVVADDKVKGH 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02293 496 CDD DnaJ 72 126 IPR001623 -
Gma13g02293 496 ProSiteProfiles dnaJ domain profile. 72 137 IPR001623 -
Gma13g02293 496 MobiDBLite consensus disorder prediction 327 342 - -
Gma13g02293 496 MobiDBLite consensus disorder prediction 178 203 - -
Gma13g02293 496 MobiDBLite consensus disorder prediction 327 394 - -
Gma13g02293 496 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 7 496 - -
Gma13g02293 496 Gene3D DnaJ domain 67 142 IPR036869 -
Gma13g02293 496 SUPERFAMILY Chaperone J-domain 66 138 IPR036869 -
Gma13g02293 496 ProSitePatterns Nt-dnaJ domain signature. 114 133 IPR018253 -
Gma13g02293 496 SMART dnaj_3 71 129 IPR001623 -
Gma13g02293 496 Pfam DnaJ domain 72 134 IPR001623 -
Gma13g02293 496 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 7 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02293 Gma-Chr13 37720752 37722242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02293 13 495 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 39.530 1.54e-102 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02293 - - gmx:100818960 861.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00547 15 4525637 4527366 Gma13g02293 13 37720752 37722242 GST
Gma07g01768 07 38830469 38832079 Gma13g02293 13 37720752 37722242 PCT
Gma13g02293 13 37720752 37722242 Gma07g01768 07 38830469 38832079 PCT