Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02292 ATGTTACGTTGGAGACAACTTCATCTAGGTTTTATGCGACTGAATGTCGATGGAGCGTGTGGAGGGGTTATCGGAGATCATACAGGAAAGTTTCAAGGAGCTTTTGCTTGCAACCTGAAATCTTGCTCAATTACTCAATTGGAGTTGTGGGCCATTCTTCATGGTATCAACATGGCAAGGGAACGAGGTTTTATGGCGTTGGAAGTTCATTCGGATTCTGAAGAAGCTATTCAAAGAGTTCAAGACAAGACTCGTGAGCCAAGGAAGTTGAATGGGGAAGAGCTGCTAGGAGTAAAAATTCAGGAATTACAGAAGCTAGAGAAACTAATAAGGAAAGGTTTGGCTCGGGTTTCAAAAGCAAAGACAACCAACAAACGAAACAGGAAGTCTTGCAAACGATCAAGGGCAGTCATTTGGGTCATCTCTTCCTGGGGATAG 438 0.4338 MLRWRQLHLGFMRLNVDGACGGVIGDHTGKFQGAFACNLKSCSITQLELWAILHGINMARERGFMALEVHSDSEEAIQRVQDKTREPRKLNGEELLGVKIQELQKLEKLIRKGLARVSKAKTTNKRNRKSCKRSRAVIWVISSWG 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02292 145 Gene3D - 11 137 IPR036397 GO:0003676
Gma13g02292 145 PANTHER OS05G0353850 PROTEIN 2 90 - -
Gma13g02292 145 CDD RNase_H_like 14 93 IPR044730 -
Gma13g02292 145 SUPERFAMILY Ribonuclease H-like 10 88 IPR012337 -
Gma13g02292 145 Pfam Reverse transcriptase-like 16 86 IPR002156 GO:0003676|GO:0004523
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02292 Gma-Chr13 37711944 37714109 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02292 78 121 MADS-box Gene Family AT4G24540 54.545 6.39e-09 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02292 - - aip:107607211 76.6405