Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02275 ATGAGTTCCAAAGGTGTTGGTGAGGATTGCCTGGGATGGGCAGCAAGAGATGCATCCGGAGTTCTATCACCTTACAAATTCAGTCGCAGGACTCTTGGGAATGAAGATGTTCATATTAAAATTACGCACTGTGGTGTTTGCTTCGCTGATGTAGTTTGGACAAGGAATAAACATGGTGACTCAAAGTATCCTGTCGTGCCTGGTCATGAGATTGCTGGGATTGTGACAAAGGTTGGCGCCAATGTCCACCATTTTAAGGTTGGCGACCATGTTGGAGTGGGGACTTATATCAACTCATGTAGGGATTGTGAGTATTGTAATGATGGACAAGAAGTTCATTGTACCAAGGGATCTGTTTACACTTTTAATGGTGTTGATTTTGATGGTACAATTACAAAAGGAGGATACTCCAGTTACATAGTAGTCCATGAGAGGTACTGCTTCATGATACCAAAAAGCTATCCATTGGCTTCCGCAGCTCCTTTGCTTTGTGCTGGAATTACTGTTTATTCACCGATGGTCCGCCACAAGATGAATCAACCTGGTAAATCTCTAGGAGTGATTGGTCTTGGTGGCCTCGGTCATATGGCAGTGAAATTTGGAAAGGCATTTGGTTTGAGTGTAACGGTTTTCAGCACTAGTATATCCAAGAAAGAGGAGGCACTGAGCCTGCTTGGTGCAGACAAATTTGTTGTTTCATCTAATCAAGAGGAAATGACGGCGTTGGCTAAATCGTTGGACTTTATAATCGACACAGCATCTGGTGATCACTCGTTTGATCCTTACATGTCACTGCTGAAGACATATGGTGTTTTTGTCCTAGTTGGTTTCCCTAGTCAAGTCAAATTTATCCCTGCAAGCCTTAATATAGGATCAAAGACTGTTGCCGGAAGTGTTACAGGTGGTACAAAAGATATACAGGAGATGATTGGCTTCTGTGCTGCAAACGAGATTCACCCAAATATAGAGGTGATTCCAATCGAGTATGCCAATGAAGCTCTTGAGAGGCTCATAAATAGGGACGTCAAGTACCGGTTTGTAATAGATGTTGAGAATTCCCTGAAAGAAAAATGA 1074 0.4264 MSSKGVGEDCLGWAARDASGVLSPYKFSRRTLGNEDVHIKITHCGVCFADVVWTRNKHGDSKYPVVPGHEIAGIVTKVGANVHHFKVGDHVGVGTYINSCRDCEYCNDGQEVHCTKGSVYTFNGVDFDGTITKGGYSSYIVVHERYCFMIPKSYPLASAAPLLCAGITVYSPMVRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLSVTVFSTSISKKEEALSLLGADKFVVSSNQEEMTALAKSLDFIIDTASGDHSFDPYMSLLKTYGVFVLVGFPSQVKFIPASLNIGSKTVAGSVTGGTKDIQEMIGFCAANEIHPNIEVIPIEYANEALERLINRDVKYRFVIDVENSLKEK 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02275 357 Gene3D - 165 320 - -
Gma13g02275 357 SUPERFAMILY GroES-like 16 183 IPR011032 -
Gma13g02275 357 CDD CAD1 12 349 - -
Gma13g02275 357 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 185 212 IPR029752 -
Gma13g02275 357 PANTHER ALDEHYDE REDUCTASE 2 354 - -
Gma13g02275 357 Pfam Alcohol dehydrogenase GroES-like domain 35 148 IPR013154 -
Gma13g02275 357 Pfam Zinc-binding dehydrogenase 192 313 IPR013149 -
Gma13g02275 357 Gene3D - 13 350 - -
Gma13g02275 357 SMART PKS_ER_names_mod 20 348 IPR020843 GO:0016491
Gma13g02275 357 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Gma13g02275 357 PANTHER - 2 354 - -
Gma13g02275 357 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 318 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02275 Gma-Chr13 37579697 37582371 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02275 2 355 Monolignol Biosynthesis Gene Families AT1G72680 73.446 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02275 K00083 - gmx:100806165 729.169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00564 15 4657608 4660350 Gma13g02275 13 37579697 37582371 GST