Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02274 ATGAAAGCGGTTATTGAACGCTACAACAAGCTAAAAGAGGAAACCCATCACCTCATGAATCCGGCTTCAGAAGAGAAGTTTTGGCAGACAGAAGCAGCAAGCTTGAGGCAGCAGCTTCAGTACTTGCAAGAATGCCACAGgcaattaatgggggaagaacttacgggtttgggtattaaagaactacaaaatctggaaaaccaactggagatgagtttaaagggtgtccgcatgaaaaaggatcaaattttaactaatgagattaaagaactacgccaaaagggaaatatcattcatcaagaaaatgttgaactctatcaaaagatggagcagatccaaaaagaaaatgcagagctacaaaagaagGTTTATGAAGCAAGGAGTACAAATGAAGAAAATGTGGCATCCAATCCTTCTTACAACGTCAGAAATGGATATGATTCACTTGCATCTATCAGTCTCCAGCTAAGTCAGCCACAGTCTCAATACAAATACAGTGAACCATCAACCAAAGCAATGAAACTCGGATTGCAGCTGCATTAG 543 0.2505 MKAVIERYNKLKEETHHLMNPASEEKFWQTEAASLRQQLQYLQECHRQLMGEELTGLGIKELQNLENQLEMSLKGVRMKKDQILTNEIKELRQKGNIIHQENVELYQKMEQIQKENAELQKKVYEARSTNEENVASNPSYNVRNGYDSLASISLQLSQPQSQYKYSEPSTKAMKLGLQLH 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02274 180 Coils Coil 59 79 - -
Gma13g02274 180 PANTHER MADS-BOX TRANSCRIPTION FACTOR 1 179 - -
Gma13g02274 180 ProSiteProfiles K-box domain profile. 25 115 IPR002487 GO:0003700|GO:0005634|GO:0006355
Gma13g02274 180 Coils Coil 102 129 - -
Gma13g02274 180 Pfam K-box region 22 109 IPR002487 GO:0003700|GO:0005634|GO:0006355
Gma13g02274 180 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02274 Gma-Chr13 37554338 37564894 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02274 1 169 MADS-box Gene Family AT2G22630 55.882 2.86e-54 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02274 K09264 - gmx:100805092 344.739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00565 15 4668206 4681913 Gma13g02274 13 37554338 37564894 GST
Gma08g00621 08 5099845 5120767 Gma13g02274 13 37554338 37564894 PCT
Gma13g02274 13 37554338 37564894 Gma08g00621 08 5099845 5120767 PCT