Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02265 ATGCAGGAGAACTACTCATACCAATCGTATCCAGATTCCGGCGAGTCCTCACCACGATCCAGAGAGATAGACTTCGACAACCCTCCTCCATGGGACGACCAAAACTACAAAGCCAAGTTCATGTGCAGCTACGGCGGCAAGATCCTCCCTCGCTCCCACGACAACCAGCTCTCCTACGTCGCCGGCGAGACCAAAATTCTCGCCGTCGACCGCTCCATCAAGTTCTCCGCCATGCTCGCCAAACTCTCCGCCCTCTGCGACGCCCCAGACAACAACAACCTCACCTTCAAGTACCAGCTTCCCGGCGAAGACCTCGACGCCCTCATCTCCGTCACCAACGACGACGACCTCGATCACATGATGCACGAATACGATCGCCTCTATCGCGCTTCCGCTAGACCCTCCCGCATGCGACTATTCCTCTTTCCCTCCGATACTCTTCCTTCCCCTCCACCTGCTGCTTCTGCTCCACCCGATTCGGTTATCAAACCTAATAACGTCGATTTTCTCTTCGGTCTCCAGCCTCAGCCACCACCTATTGATGTCAAATTCAATGATCCGCTGCCGGAGCCCGTGGCGCCGCCGCCGGAGCATCCGTTGCGATTCAATTTTAACCCTGCGGTCTCGGATCCGAGCGCGATTCAGCGCCAGTTGCAGCAACTGCAAATTGCGGAGAACGAGCAAGCTGCGCATCGGAGGAAGGGTGAGGATAATTACCCCGCCGGTGATTACTACGTTCAAAAAGTGCCTGAGAAGTTCCCCCCACCGAATTTTCTGGCAAGCTCGCCGGGTTATTGGCCTGAAAAACATGTTTCCGGCGACGTTTATCCTCCGGCTGTGACGGCTACGTCCGGCGGAGGGGAACCGTCGGTTTATATGGTTCCGGCGCCGGGGACGTTCTATCATGCACCGGTTATGCGGCCTCCACCTCCAGCAACTCAGGGATACTACACCGTGCAACGAATGGGTTCCGATAATTACCGTGAAGCGCCGGTGTACGGCGGTGTTCCGCCGCCAAAAGCGGCGGTTCCGGCGAGTATGGCGCCAGCCCAGCAGCCGATTAAGGCTCCCGCGTATACGGAAGGATTCGGAATGGTTCGGCCAGGTGGGATAGTGGATAATACTGGTGTTCCGTACGCGCAGGTGGCGTACGATAGTGGAAGTGGGAGACAGGTTTATTATACTGCGCCCGGTGGTGGTGTAACGCACGCTCCTCCGTACCATGGGGTTTTTCCGCCCGTAACCGCTGATATGAGACTGGGAGGGGTTTCGTTTGGTCAGGATGTTAAAGTCATAAGCAAGCTTACCCAAGGTTCAGTCTGA 1323 0.5646 MQENYSYQSYPDSGESSPRSREIDFDNPPPWDDQNYKAKFMCSYGGKILPRSHDNQLSYVAGETKILAVDRSIKFSAMLAKLSALCDAPDNNNLTFKYQLPGEDLDALISVTNDDDLDHMMHEYDRLYRASARPSRMRLFLFPSDTLPSPPPAASAPPDSVIKPNNVDFLFGLQPQPPPIDVKFNDPLPEPVAPPPEHPLRFNFNPAVSDPSAIQRQLQQLQIAENEQAAHRRKGEDNYPAGDYYVQKVPEKFPPPNFLASSPGYWPEKHVSGDVYPPAVTATSGGGEPSVYMVPAPGTFYHAPVMRPPPPATQGYYTVQRMGSDNYREAPVYGGVPPPKAAVPASMAPAQQPIKAPAYTEGFGMVRPGGIVDNTGVPYAQVAYDSGSGRQVYYTAPGGGVTHAPPYHGVFPPVTADMRLGGVSFGQDVKVISKLTQGSV 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02265 440 Gene3D - 58 144 - -
Gma13g02265 440 MobiDBLite consensus disorder prediction 1 30 - -
Gma13g02265 440 Coils Coil 214 234 - -
Gma13g02265 440 CDD PB1_UP2 41 142 - -
Gma13g02265 440 SMART PB1_new 52 144 IPR000270 GO:0005515
Gma13g02265 440 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P 1 434 - -
Gma13g02265 440 MobiDBLite consensus disorder prediction 1 16 - -
Gma13g02265 440 SUPERFAMILY CAD & PB1 domains 53 146 - -
Gma13g02265 440 Pfam PB1 domain 53 143 IPR000270 GO:0005515
Gma13g02265 440 PANTHER OS05G0427100 PROTEIN-RELATED 1 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02265 Gma-Chr13 37468642 37470405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02265 32 144 MAP Kinase Kinase Kinase AT5G57610 45.133 2.08e-26 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02265 - - gmx:100801566 839.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00573 15 4760746 4762426 Gma13g02265 13 37468642 37470405 GST
Gma07g01792 07 39072132 39073553 Gma13g02265 13 37468642 37470405 PCT
Gma08g00617 08 5072715 5074300 Gma13g02265 13 37468642 37470405 PCT
Gma13g02265 13 37468642 37470405 Gma07g01792 07 39072132 39073553 PCT
Gma13g02265 13 37468642 37470405 Gma08g00617 08 5072715 5074300 PCT