Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02242 ATGAGCTTCAAGGAATTATGCAAGGCAACCGATTACTTTAGCACAGATAACGTTTTAGGGATAGGAACGACATGGATTATGTACAAGGCAAAGGTACCAAATAACTGTTTTCTAGCAGTTAAGAGACTATATGGCGCTGATGAATACAAGAGGGAATTCTTGCTTGAAACAATGATTCTGGGGAGACACAGGCACAGAAACATAGCTCCATTGGTAGGATTCTGCATAGAAAAAAGAGAAAGGATTTTGGTGTATAAGTACATGTCTAATGGAAGACTCAGTGATTGGTTCCATTCTGATGAAGGAGATCAAAAAATAAAACTAGAATGGCCAGAGAGAATTCACATTGCACTTGGGATTGCAAGAGGTTTATCTTGGCTCCACAAAAGGTGCAAGATATTCCATCTTAATTTAGATTCAGAGTGTGTCTTGCTAGACAGGTATTTTGAGCCAAAAATATCCAATTTTGAGAAGGCAAAATTTCTAAACCATACAGTTGAAGATCATGTGAGGATGAAtgttatgaattag 531 0.3691 MSFKELCKATDYFSTDNVLGIGTTWIMYKAKVPNNCFLAVKRLYGADEYKREFLLETMILGRHRHRNIAPLVGFCIEKRERILVYKYMSNGRLSDWFHSDEGDQKIKLEWPERIHIALGIARGLSWLHKRCKIFHLNLDSECVLLDRYFEPKISNFEKAKFLNHTVEDHVRMNVMN 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02242 176 PANTHER RECEPTOR-LIKE PROTEIN 55 1 167 - -
Gma13g02242 176 Gene3D Phosphorylase Kinase; domain 1 1 87 - -
Gma13g02242 176 Pfam Protein tyrosine and serine/threonine kinase 22 162 IPR001245 GO:0004672|GO:0006468
Gma13g02242 176 SUPERFAMILY Protein kinase-like (PK-like) 2 169 IPR011009 -
Gma13g02242 176 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 1 167 - -
Gma13g02242 176 Gene3D Transferase(Phosphotransferase) domain 1 88 175 - -
Gma13g02242 176 ProSiteProfiles Protein kinase domain profile. 13 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02242 Gma-Chr13 37295355 37295885 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02242 2 174 Receptor kinase-like Gene Family AT5G45780 40.909 1.54e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Gma13g02242 PK_Tyr_Ser-Thr 1.1e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02242 - - gsj:114373320 366.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00599 08 4929747 4932433 Gma13g02242 13 37295355 37295885 PCT
Gma13g02242 13 37295355 37295885 Gma08g00599 08 4929747 4932433 PCT