Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02235 ATGGCTTCCCGCATCGAGAACAGACCTCCTCGCAGCCTCTCCAATAAAAAGGGGGCCACTGAAGAAGTTTTCTCCGACAAGCGTCGAAGGATTGGATCGGAGAGGATGGAGCGACAGGGAGGCAGAGGCAGGGCTCCCTTGGGTGCTCTAAAGGCAGATGCTAATGATGGTGCCGGTGCCGAGGGTTCCGAATGTAGCACTGTTGACTTCACCAAAGAGGAAGTAGAGGCCCTGCTGATGGAGAAGACAAACACGAAGGAGAATCGCTATGATAATAAGAAAAAAATGGACCAGATGGGTGATCTCATTAAAAGGCTTAAACTCTGCGTTAGATGGTTTAAGAGAGTTGAAGAAGGCTATATCCTACAGAAAGAGAAGCTTCAGACTGACCTACAGTCTGCTGAGAAGAAATGCCTTGATATTGAGAATGAGATGAAAATTAAGATTGCAGAGTTGGATGAGACCATATCTAATTTGAGGGTGACAATTTCCTCTTTAGAAGAGAGAATTGCAAAGGAAGCGTCAGATAAATTGGAAGCTATTGCTTGTTATGGAAAAGAACAGGAAGCCAGAAGTGCAGCTGAGCAGATGCAAGCTTCTATTTCAACTGAGCTTGAGAGAGTTCGGGAAGAGAAATCAACTGCTGAGAGAAAGGCCATTTCAAATGAGGACTTGTACAAAAGATCACAAGAGTATAATATGAGTCTGCAACAGTACAATAGTCGCCTTCAGTCGGATCTTGAAATAACTAATGAGGCACATAAACGATTGGAGACGGAGAAAGCAACCATTGTTGAGAACCTTAGCAATGTGAGAGGCCACAACAAGGCATTACAGGACCAGTTGGCATCTCTTAAAGCTTCACAGGATGAGGCTGCAAAGCAGAAAGAAATGTTAACAAATGAACTCAAATGCCTTCGGGAAGAATTAAAACAAATTAGAGATGATCGAGATCGCCAACAGCTACAAGTACAAACTTTGATGGGAGATGTAGAAAAATACAAAGAATACACAGGGAAATCATGTGCGCAGTTGGATACCTTGACAATTAAAACAAATGCTCTTGAGGGGACATGTTCTTCTCAAAGGGACCAAATAAATATGCTGCAACAGCAGTTGATTGCAGAAAGGGAGAAGTCAAAGATGGCTGATTTATCTGCTTCAGAAACAAGAACAGTGTTTGAAGATCAGAAAAGAATTATATGTGAACTCCAGGAACGACTGGCAGAGAAAGAATTCCAAGTAATTGAAGGGGAGAAGTTAAGGAAAAAATTGCATAACACTATCCTGGAGCTAAAAGGAAATATTCGCGTGTTCTGCCGTGTCCGACCTTTGCTACCGGATGATGGTCCTGGAACAGACATGGTTGTTTCGTATCCCACATCAACAGAAGCTCTTGGTCGGGGTATTGAATTACTACAGAGTGGGCAGAAGTACCCTTTTACATTTGACAAGGtatttaatcatgaggcttctcagcaagatgttttcactgagatatcacagctggtacaaagtgcgcttgatggatacaagGTCTGTATCTTTGCCTATGGACAGACAGGTTCAGGAAAAACCTATACAATGATGGGTAGGCCGGATGCCCCCGATCTGAAGGGGTTGATACCACGTTCTCTAGAACAGATATTCGAGATAAGTCAGTCCCTGAAGGATCAGGGGTGGACGTTCAAAATGCAGGCTTCAGTATTGGAAATATATAACGAGACCCTCAGGGATTTGTTATCATCAAATCGGTCAAGTGGTATTGACTCAACACGAATAGAAAACGGTGTTCCTGTTTCTGGAAAGCAGCCATACACTATTATGCACGATGTCAACGGAAACACACATGTTTCAGACCTCACTATAAAGAACGTTTCTAGTGCAAGTGAGATTTCATCTCTTCTGCAACAGGCAGCACAAAGCAGGTCTGTAGGAAGAACACACATGAATGAACAGTCATCACGAAGTCACTTTGTCTTTACTTTGCGTATATCTGGGACCAATTCGAACACTGACCAACAAGTGCAAGGTGTGTTAAACCTGATTGATTTGGCTGGAAGTGAAAGACTGTCCAGGAGTGGGGCAACCGGGGACCGGTTGAAGGAAACTCAGGCTATCAACAAAAGTCTCTCCTCTTTGAGTGATGTCATATTTGCTTTGGCAAAGAAACAGGAGCATGTACCCTTTAGGAATTCAAAATTGACATACCTTCTCCAGCCATGTCTTGGTGGGGATTCCAAAACTTTGATGTTTGTGAACATCTCACCTGATCCATCTTCAACTGGAGAGTCACTTTGCTCTCTTCGGTTTGCTGCTGGAGTGAATGCCTGCGAGATTGGTATCCCGCGGCGTCAGACATCCACACGGTCCCTTGATTCTCGTTTGAGCAGCGGCTAA 2400 0.4242 MASRIENRPPRSLSNKKGATEEVFSDKRRRIGSERMERQGGRGRAPLGALKADANDGAGAEGSECSTVDFTKEEVEALLMEKTNTKENRYDNKKKMDQMGDLIKRLKLCVRWFKRVEEGYILQKEKLQTDLQSAEKKCLDIENEMKIKIAELDETISNLRVTISSLEERIAKEASDKLEAIACYGKEQEARSAAEQMQASISTELERVREEKSTAERKAISNEDLYKRSQEYNMSLQQYNSRLQSDLEITNEAHKRLETEKATIVENLSNVRGHNKALQDQLASLKASQDEAAKQKEMLTNELKCLREELKQIRDDRDRQQLQVQTLMGDVEKYKEYTGKSCAQLDTLTIKTNALEGTCSSQRDQINMLQQQLIAEREKSKMADLSASETRTVFEDQKRIICELQERLAEKEFQVIEGEKLRKKLHNTILELKGNIRVFCRVRPLLPDDGPGTDMVVSYPTSTEALGRGIELLQSGQKYPFTFDKVFNHEASQQDVFTEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPDAPDLKGLIPRSLEQIFEISQSLKDQGWTFKMQASVLEIYNETLRDLLSSNRSSGIDSTRIENGVPVSGKQPYTIMHDVNGNTHVSDLTIKNVSSASEISSLLQQAAQSRSVGRTHMNEQSSRSHFVFTLRISGTNSNTDQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKQEHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDPSSTGESLCSLRFAAGVNACEIGIPRRQTSTRSLDSRLSSG 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02235 799 Coils Coil 198 218 - -
Gma13g02235 799 Coils Coil 117 176 - -
Gma13g02235 799 MobiDBLite consensus disorder prediction 20 41 - -
Gma13g02235 799 Coils Coil 275 323 - -
Gma13g02235 799 Coils Coil 68 88 - -
Gma13g02235 799 ProSiteProfiles Kinesin motor domain profile. 435 778 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma13g02235 799 CDD KISc_C_terminal 433 780 - -
Gma13g02235 799 Pfam Kinesin motor domain 441 776 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma13g02235 799 SMART kinesin_4 433 786 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma13g02235 799 PANTHER KINESIN-LIKE PROTEIN KLP-3 37 799 - -
Gma13g02235 799 Coils Coil 240 260 - -
Gma13g02235 799 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 396 775 IPR027417 -
Gma13g02235 799 PRINTS Kinesin heavy chain signature 510 531 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma13g02235 799 PRINTS Kinesin heavy chain signature 648 665 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma13g02235 799 PRINTS Kinesin heavy chain signature 679 697 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma13g02235 799 PRINTS Kinesin heavy chain signature 728 749 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma13g02235 799 Gene3D Kinesin motor domain 376 780 IPR036961 -
Gma13g02235 799 PANTHER KINESIN-LIKE PROTEIN 37 799 - -
Gma13g02235 799 MobiDBLite consensus disorder prediction 1 64 - -
Gma13g02235 799 ProSitePatterns Kinesin motor domain signature. 678 689 IPR019821 GO:0003777|GO:0005524|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02235 Gma-Chr13 37252277 37258320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02235 344 792 Calmodulin-binding Proteins AT5G65930 35.652 3.12e-76 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02235 K10405 - gmx:100808278 1501.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00599 15 4917733 4923829 Gma13g02235 13 37252277 37258320 GST
Gma07g01813 07 39291908 39308478 Gma13g02235 13 37252277 37258320 PCT
Gma08g00596 08 4902388 4909169 Gma13g02235 13 37252277 37258320 PCT
Gma13g02235 13 37252277 37258320 Gma07g01813 07 39291908 39308478 PCT
Gma13g02235 13 37252277 37258320 Gma08g00596 08 4902388 4909169 PCT