Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02224 ATGGCTGAGGATTTTCAAGCTGCTATCTGTGGTGAAAATTGGTGGAATAATATTAATCCAACAAGAAGTGTCTTTCCTCTTATGCCATCAACTTGTTCGGTGGCAGCAGCTGATCATGCAGGAAACTACAGCACTTGGCAAAGTACTACTGATTTCGTTGATTTGAAGGGAACAAGGTCTTGTGCTGAGCTGGAGACTGATAATAACTTGAGTTTTCTTGATGCTGAGAAGCCACAGCAGAGTGAAAGTGGTAGCATCTTGATCAATTCCACCTTACAAATGATGGGTTTTGGCAAGTCATCTTCAACTTCATCGAATTGGAATCAATCTTTATTAGGGAGCGGTTTTGATTCTGTGCTTCAAGAAGAAACAGGCATAGGTGGTGGCAGCCAAGTTTCCACCGTTGATGCTTTGAAGCCAATGAACCAAGAATTTTCCTTGGATCAGCAGAGTCTGAATTCTGTTGTTACAAGCACTGGATCATTATCTGGTGGTTTCCCAGTTGTTTCAGCCTCCTATGGTTACCCTTCAACATTGATACAAAGCTTATATGAGCCTGAGCCTCAACCACAACAACAGAACTCACTTTTCACCAACCCCTCCATGTCCTACTCATCATCTTCCGCAAACTATGGGATATGTTCCAATGAACTGTCACCAACTTGGTCCAAAGTTTCTTCCCTTCCCAAACCCTCAATGCCAAAGCAACAGCTCAGTGGATTGCACTTTTCCAACAACACTGCTTTCTGGAATTCTTCAGCCGAAGCACTTAATGACATAAGAGCAGGTGTTTTTACTTCATCACAAGCCCAATATCAAACGGCAAAATTTGAAGAGAAACCCAACTGCCCCAATACTCTATTAAACAAGCTCAAGAGAGAAGAATCACCAGACGCAGCGAAGAAAAATTCTCCTGAGCCTGCATTCAAGAGGCAAAGAATTGAGACTCCATCTCCATTACCAACTTTTAAGGTTAGGAAAGAAAAGCTGGGGGACCGCATCACTGCTCTTCAGCAATTGGTTTCACCTTTCGGAAAGACGGATACAGCATCCGTTCTTCACGAAGCCATCGAGTACATCAAGTTCCTCCATGACCAAGTCAGTGTTTTGAGCACTCCATATATGAAAAACAACGGAGCTCCCATTCAACACCAGCAGGATTGTGATAATCTGAAGGACTCAGAAGGGGCAAAACAAGATTTGAGAAGCCGAGGGCTGTGTTTGGTGCCGATTTCAAGCACATTCCCAGTGGCTAATGAGACCAGTGTTGATTTCTGGACGTCTACATTTGGAGGCGCACTCATTGGCAGGTAG 1314 0.4384 MAEDFQAAICGENWWNNINPTRSVFPLMPSTCSVAAADHAGNYSTWQSTTDFVDLKGTRSCAELETDNNLSFLDAEKPQQSESGSILINSTLQMMGFGKSSSTSSNWNQSLLGSGFDSVLQEETGIGGGSQVSTVDALKPMNQEFSLDQQSLNSVVTSTGSLSGGFPVVSASYGYPSTLIQSLYEPEPQPQQQNSLFTNPSMSYSSSSANYGICSNELSPTWSKVSSLPKPSMPKQQLSGLHFSNNTAFWNSSAEALNDIRAGVFTSSQAQYQTAKFEEKPNCPNTLLNKLKREESPDAAKKNSPEPAFKRQRIETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVSVLSTPYMKNNGAPIQHQQDCDNLKDSEGAKQDLRSRGLCLVPISSTFPVANETSVDFWTSTFGGALIGR 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02224 437 MobiDBLite consensus disorder prediction 291 318 - -
Gma13g02224 437 Gene3D - 324 381 IPR036638 GO:0046983
Gma13g02224 437 CDD bHLH_AtbHLH_like 320 371 IPR045239 -
Gma13g02224 437 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 324 378 IPR036638 GO:0046983
Gma13g02224 437 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 314 363 IPR011598 GO:0046983
Gma13g02224 437 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 52 425 - -
Gma13g02224 437 PANTHER TRANSCRIPTION FACTOR BHLH123 52 425 - -
Gma13g02224 437 MobiDBLite consensus disorder prediction 291 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02224 Gma-Chr13 37158649 37161732 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02224 1 432 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 40.444 1.32e-68 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02224 - - gmx:100805087 845.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00609 15 4984799 4988153 Gma13g02224 13 37158649 37161732 GST
Gma07g01827 07 39436647 39439924 Gma13g02224 13 37158649 37161732 PCT
Gma08g00583 08 4823513 4827259 Gma13g02224 13 37158649 37161732 PCT
Gma13g02224 13 37158649 37161732 Gma07g01827 07 39436647 39439924 PCT
Gma13g02224 13 37158649 37161732 Gma08g00583 08 4823513 4827259 PCT