Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02219 ATGAGGAGGAGGAGAGTGAGAATGAACAAAATTGTTATTATTTTTGCTTGTCTATCAATGCTTCAGAAAATGGCATATGCAGCTGATGCCTTGACTCCAACATCCTCCATTAATGATGGCCAAGAACTAATTTCTGCTGGACAAAATTTTTCTCTAGGATTCTTCACACCAGGAATCTCCAAAAGCCGCTACGTAGGGATATGGTACAAGAATATTATGCCTCAAACCGTGGTTTGGGTAGCAAATAGAGATTACCCACTCAATGACTCAAGTGGAAACTTAACCATTGTTGCTGGGAATATTGTACTTTTTGATGGATCAGGTAACAGGATATGGTCTACAAATTCATCAAGATCATCAATTCAAGAACCAATGGCAAAACTGCTGGATTCTGGAAATTTAGTCTTGATGGATGGAAAGAGCAGTGATTCTGATAGTTACATATGGCAAAGCTTTGATTATCCAACAGATACAACGGTACCTGGCTTGAAATTGGGTTGGGACAAGACCTCAGGTCTCAACAGATATTTGACTTCTTGGAAAAGTGCTAATGACCCTTCTGCTGGAAGCTTTACTTACGGCTTTCACCATAACGAAATTACTGAGTTTGTATTGCGCCAGGGAATGAAAATCACATTCAGAAGTGGGATTTGGGATGGCACTCGTTTAAATTCAGATGATTGGATATTTAATGAAATTACAGCCTTCAGGCCAATAATTTCAGTAACTAGCACTGAGGCACTGTATTGGGATGAACCTGGAGATAGATTGTCAAGGTTTGTGATGAAAGATGATGGAATGCTTCAAAGGTATATATGGGACAACAAAGTTCTTAAGTGGATTGAGATGTATGAGGCAAGAAAAGATTTTTGTGATGACTATGGAGCATGTGGGGTGAATGGTATTTGCAATATTAAGGATGTTCCTGTTTACTGTGATTGCTTGAAAGGCTTCAAACCCAAATCACAGGAAGAATGGAATTCATTTAATCGGTCTGGTGGGTGCATCAGGAGAACACCCTTAAACTGCACACAAGGTGATAGGTTTCAGAAATTAAGTGCGATAAAACTACCCAAGTTGTTGCAATTTTGGACTAATAATAGCATGAATCTTGAAGAATGCAAGGTGGAGTGCTTGAAGAACTGTTCTTGCACCGCATATGCAAATTCTGCCATGAATGAAGGGCCTCATGGATGCTTTCTTTGGTTTGGGGACTTGATTGACATTAGGAAGCTTATAAATGAAGAGGCTGGACAACTTGATCTTTACGTAAAGTTAGCCGCTTCAGAAATAGAGTCCACTGCTAATGCTATTAAAAGGAGAAAGATAGCACTGATTATTTCAGCATCTTTGGTGGCACTGCTGCTTTTGTGTATTATTTTGTACCTTTCTAAGAAGTATATAAAAGAGAGGACCACTACTGATTTGGTCGCAGGTAATAGAAATCATAATGAACATCAAGCATCGCCTCTTTTTCATATAGACACTATTCTGGCTGCTACAAACAATTTTTCTACTGCAAACAAGATTGGAGAAGGTGGTTTTGGCCCAGTATACAGGggtaaattggcagatggacaagaaatagctgtgaaaaggctatcaaaaacctcaaagcaaggcatctcagagtttatgaatgaagttggattggtagccaaactccaacaccgtaatcttgtgagtattttgggagggtgcactcaaggagatgaaagaatgttagtctatgaatacatggcaaatagtagcttggaccacttcatttttgATCCTACACAAAGAAAATTTttgaattggaggaaacggtatgaaattattatggggatttctcggggactactttatctccatcaagattcaaagttaaccattattcacagggatctaaaaactagtaacattctactagacagcgaattgaaccccaaaatttctgattttggtcttgcccacatctttgaaggagatcattctacagtaacaacaaaaagaattgttgggacagtTGGTTATATGTCCCCCGAGTATGCAGCAAATGGGCTTCTTTCCCTAAAGTCTGATGTATTCAGCTTTGGAGTTATAGTGTTAGAGATACTAAGTGGCATCAGAAATAATAATTTCTACCATTCAGATCATGAGCGCAATCTGTTGGTGCAGGCATGGAGATTATGGAAAGAAGGTCGAGCTGTGGAATTCATGGATGCTAATTTAGACCTTGCAACTATTCGATCAGAATTACTAAGGTGTCTGCAAGTTGGTCTCTTGTGTGTGCAAAAGTTACCAAAAGACAGACCAACTATGTCATCTGTGGTTTTCATGTTGAGCAATGAAAGCATTACACTTGCCCAACCAAAGAAGCCTGAATTCATTGAAGAAGGATTAGAGTTTCCAGGGTACAGCAACAATTCTATGACTATTACTCTATTAGAAGCTCGAAATTAG 2445 0.3227 MRRRRVRMNKIVIIFACLSMLQKMAYAADALTPTSSINDGQELISAGQNFSLGFFTPGISKSRYVGIWYKNIMPQTVVWVANRDYPLNDSSGNLTIVAGNIVLFDGSGNRIWSTNSSRSSIQEPMAKLLDSGNLVLMDGKSSDSDSYIWQSFDYPTDTTVPGLKLGWDKTSGLNRYLTSWKSANDPSAGSFTYGFHHNEITEFVLRQGMKITFRSGIWDGTRLNSDDWIFNEITAFRPIISVTSTEALYWDEPGDRLSRFVMKDDGMLQRYIWDNKVLKWIEMYEARKDFCDDYGACGVNGICNIKDVPVYCDCLKGFKPKSQEEWNSFNRSGGCIRRTPLNCTQGDRFQKLSAIKLPKLLQFWTNNSMNLEECKVECLKNCSCTAYANSAMNEGPHGCFLWFGDLIDIRKLINEEAGQLDLYVKLAASEIESTANAIKRRKIALIISASLVALLLLCIILYLSKKYIKERTTTDLVAGNRNHNEHQASPLFHIDTILAATNNFSTANKIGEGGFGPVYRGKLADGQEIAVKRLSKTSKQGISEFMNEVGLVAKLQHRNLVSILGGCTQGDERMLVYEYMANSSLDHFIFDPTQRKFLNWRKRYEIIMGISRGLLYLHQDSKLTIIHRDLKTSNILLDSELNPKISDFGLAHIFEGDHSTVTTKRIVGTVGYMSPEYAANGLLSLKSDVFSFGVIVLEILSGIRNNNFYHSDHERNLLVQAWRLWKEGRAVEFMDANLDLATIRSELLRCLQVGLLCVQKLPKDRPTMSSVVFMLSNESITLAQPKKPEFIEEGLEFPGYSNNSMTITLLEARN 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02219 814 Gene3D - 23 152 IPR036426 -
Gma13g02219 814 SUPERFAMILY Protein kinase-like (PK-like) 485 775 IPR011009 -
Gma13g02219 814 SMART serkin_6 504 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02219 814 SMART ntp_6 344 426 IPR003609 -
Gma13g02219 814 ProSiteProfiles Bulb-type lectin domain profile. 28 149 IPR001480 -
Gma13g02219 814 Pfam S-locus glycoprotein domain 213 322 IPR000858 GO:0048544
Gma13g02219 814 Pfam PAN-like domain 343 409 IPR003609 -
Gma13g02219 814 SMART blect_4 34 155 IPR001480 -
Gma13g02219 814 Pfam D-mannose binding lectin 76 181 IPR001480 -
Gma13g02219 814 CDD STKc_IRAK 510 775 - -
Gma13g02219 814 ProSiteProfiles Protein kinase domain profile. 504 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02219 814 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 12 809 - -
Gma13g02219 814 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 186 IPR036426 -
Gma13g02219 814 CDD PAN_AP_plant 339 427 - -
Gma13g02219 814 PIRSF SRK 3 813 IPR024171 GO:0004674
Gma13g02219 814 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Gma13g02219 814 ProSiteProfiles PAN/Apple domain profile. 343 427 IPR003609 -
Gma13g02219 814 Gene3D Transferase(Phosphotransferase) domain 1 580 788 - -
Gma13g02219 814 Pfam Protein tyrosine and serine/threonine kinase 506 773 IPR001245 GO:0004672|GO:0006468
Gma13g02219 814 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 12 809 - -
Gma13g02219 814 CDD B_lectin 34 155 IPR001480 -
Gma13g02219 814 Gene3D Phosphorylase Kinase; domain 1 465 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02219 Gma-Chr13 37120321 37124345 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02219 469 794 Receptor kinase-like Gene Family AT4G11530 54.434 1.39e-117 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma13g02219 PK_Tyr_Ser-Thr 7.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02219 - - gmx:100803488 1622.83