Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02217 ATGCCTGGTTTCTTATTCTTCCTCTTTTGCTTCTTCTTGGCATCATCGCAACACATCACAATTTCATTCTCCGCAGACACATTAACCTCAACACAAATTCTTCTAACCAACCAAACCCTCATATCCCCAAGCCAAGTcttcgctctaggcttctttccggggaccaattccacttggtacttaggcacatggtacaacaacatcaacgacagaaccatagtatgggtagccaacagagacaacCCTCTCGAGAACTCCAATGGTTTTCTAACCATCGCAGAAAACGGAAACATAGTCCTTACAAATCCATCAATGAAGAAGTACCCCGTTTGGTCCTCCAACGCAACAACCAAAGCCAACAACAACAATCGCGTGCTTCAGCTTCTGGACACAGGAAACCTAGTTCTCAGAGAAGCAAACATAACCGACCCAACAAAATATCTCTGGCAAAGCTTCGATTACCCAACAGACACGCTCTTACCCGGCATGAAAATGGGGTGGAACCTAGACACTGGCGTTGAGAAACACTTAACATCGTGGAAAGCCACAGGGAGCGACCCTTCAAGCGGAGATTACTCTTTCAAGATAGACACTCGTGGAATACCAGAAATTTTCTTAAGGGATGACCAGAACATAACATACAGAAGTGGCCCTTGGAATGGTGAGAGATTCAGCGGGGTGCCAGAGATGCAACCCAACACAGATACTATTACGTTTGATTTTTCTTACGATAAAGATGGTGTGTACTATTTGTTTTCCATTGGAAGCCGTTCTATTTTGTCGAGGCTGGTTTTGACTTCGGGTGGTGAACTTCAGCGTCTTACTTGGGTGCCAAGTAGAAACACTTGGACCAAGTTTTGGTACGCGCGTAAGGATCAGTGTGATGGCTACAGAGAGTGTGGTCCTTATGGTTTGTGTGACTCCAACGCTTCGCCGGTTTGCACGTGCGTGGGAGGGTTCAGGCCGAGGAACTTGCAAGCGTGGAATTTGAGAGATGGTTCTGATGGGTGTGTGAGGAACACGGATTTGGATTGTGGGAGGGACAAGTTTTTGCATTTGGAGAACGTGAAGCTGCCAGAGACAACCTATGTGTTTGCGAACAGGACTATGAACCTAAGGGAGTGTGAGGATTTGTGCCGTAAGAATTGTTCTTGCACTGCTTATGCCAACATTGAGATCACAAACGGTGGAAGCGGGTGCGTGACGTGGACTGGTGAACTCATAGATATGAGGCTGTATCCTGCGGGTGGACAAGATCTTTATGTTAGATTAGCAGCTTCTGACGTAGATGACATAGGATCTGGAGGTGGCTCTCACAAGAAAAACCATATAGGTGAGGTTGTAGGAATTACAATTTCTGCAGCTGTAATAATATTGGGATTGGTTGTCATTTTCTGGAAGAAGAGGAAACTGTTGAGTATATCAAATGTGAAGGCAGGCCCTAGAGGTTCTTTCCAAAGAAGTCGGGATTTGCTGATGACTGTACAAAGGAAGTTTTCAACTAATAGAAAAAACTCAGGAGAAAGGAACATGGATGACATAGAGTTGCCAATGTTTGATTTTAATACCATAACAATGGCCACAGACAACTTCTCTGAAGCAAATAAACTTGGACAAGGAGGATTTGGTACTGTTTACAGGGGAAGGTTGATGGAAGGCCAagatattgctgtcaagaggctatcaaaaagctccatgcaaggagttgaagaatttaagaatgaaatcaagttaattgtcaggcttcaacatcgaaatcttgttcggctcttcggttgttgcattgagatgcatgagaggttgctagtgtatgagtacatggaaaacagaagtcttgattccattttgtttgACAAAGCCAAaaaacccatattggactggaaaagacgcttcaacattatatgcggcatagctagagggctactttatctgcaccatgattccagatttaggattatccatagggatctcaaggctagcaacattctacttgacagtgaaatgaacccaaagatatcagactttgggatggctagactttttggctcaaatcagacagaagcaaacacatcgagagttgttgggacatatggctatatgtctcctgaatatgctatggacgggaacttctcagtgaaatctgatgtttttagctttggagttttagtgctggaaattataactgggaagaaaaatagaggattctattaCTCAAATGAAGATATGAATCTTCTAGGGAATgcatggaggcagtggagagatggcagtgcattggaactcattgattcgtccactggcgattcatattcaccatctgaagttcttagatgcatacacgttggactcttgtgtgtccaagaacgtgcagaagataggccaacaatgTCTTCAGTGTTGTTGATGCTGAGTAGTGAATCCGTGTTAATGCCACAACCCAGAAACCCTGGGTTTTCCATAGGGAAGAATCCTGCGGAGACTGATTCTTCTTCAAGCAAGAAAGATGAATCATGGAGTGTGAACCAAGTCACAGTCACATTACTAGATGCTAGGTAG 2553 0.3075 MPGFLFFLFCFFLASSQHITISFSADTLTSTQILLTNQTLISPSQVFALGFFPGTNSTWYLGTWYNNINDRTIVWVANRDNPLENSNGFLTIAENGNIVLTNPSMKKYPVWSSNATTKANNNNRVLQLLDTGNLVLREANITDPTKYLWQSFDYPTDTLLPGMKMGWNLDTGVEKHLTSWKATGSDPSSGDYSFKIDTRGIPEIFLRDDQNITYRSGPWNGERFSGVPEMQPNTDTITFDFSYDKDGVYYLFSIGSRSILSRLVLTSGGELQRLTWVPSRNTWTKFWYARKDQCDGYRECGPYGLCDSNASPVCTCVGGFRPRNLQAWNLRDGSDGCVRNTDLDCGRDKFLHLENVKLPETTYVFANRTMNLRECEDLCRKNCSCTAYANIEITNGGSGCVTWTGELIDMRLYPAGGQDLYVRLAASDVDDIGSGGGSHKKNHIGEVVGITISAAVIILGLVVIFWKKRKLLSISNVKAGPRGSFQRSRDLLMTVQRKFSTNRKNSGERNMDDIELPMFDFNTITMATDNFSEANKLGQGGFGTVYRGRLMEGQDIAVKRLSKSSMQGVEEFKNEIKLIVRLQHRNLVRLFGCCIEMHERLLVYEYMENRSLDSILFDKAKKPILDWKRRFNIICGIARGLLYLHHDSRFRIIHRDLKASNILLDSEMNPKISDFGMARLFGSNQTEANTSRVVGTYGYMSPEYAMDGNFSVKSDVFSFGVLVLEIITGKKNRGFYYSNEDMNLLGNAWRQWRDGSALELIDSSTGDSYSPSEVLRCIHVGLLCVQERAEDRPTMSSVLLMLSSESVLMPQPRNPGFSIGKNPAETDSSSSKKDESWSVNQVTVTLLDAR 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02217 850 SMART blect_4 31 155 IPR001480 -
Gma13g02217 850 Gene3D Transferase(Phosphotransferase) domain 1 607 809 - -
Gma13g02217 850 SUPERFAMILY Protein kinase-like (PK-like) 506 802 IPR011009 -
Gma13g02217 850 Pfam Domain of unknown function (DUF3403) 804 850 IPR021820 GO:0004674
Gma13g02217 850 PANTHER - 16 849 - -
Gma13g02217 850 CDD PAN_AP_plant 341 425 - -
Gma13g02217 850 CDD STKc_IRAK 537 802 - -
Gma13g02217 850 ProSitePatterns Protein kinases ATP-binding region signature. 537 559 IPR017441 GO:0005524
Gma13g02217 850 Gene3D Phosphorylase Kinase; domain 1 505 606 - -
Gma13g02217 850 SMART ntp_6 345 424 IPR003609 -
Gma13g02217 850 Pfam D-mannose binding lectin 72 181 IPR001480 -
Gma13g02217 850 PIRSF SRK 1 850 IPR024171 GO:0004674
Gma13g02217 850 SMART serkin_6 531 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02217 850 ProSitePatterns Serine/Threonine protein kinases active-site signature. 652 664 IPR008271 GO:0004672|GO:0006468
Gma13g02217 850 ProSiteProfiles Bulb-type lectin domain profile. 25 149 IPR001480 -
Gma13g02217 850 SUPERFAMILY alpha-D-mannose-specific plant lectins 59 220 IPR036426 -
Gma13g02217 850 CDD B_lectin 31 155 IPR001480 -
Gma13g02217 850 MobiDBLite consensus disorder prediction 811 839 - -
Gma13g02217 850 ProSiteProfiles Protein kinase domain profile. 531 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02217 850 Pfam S-locus glycoprotein domain 214 323 IPR000858 GO:0048544
Gma13g02217 850 Gene3D Hepatocyte Growth Factor 344 419 - -
Gma13g02217 850 Gene3D - 20 152 IPR036426 -
Gma13g02217 850 Pfam Protein tyrosine and serine/threonine kinase 534 799 IPR001245 GO:0004672|GO:0006468
Gma13g02217 850 ProSiteProfiles PAN/Apple domain profile. 345 425 IPR003609 -
Gma13g02217 850 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 16 849 - -
Gma13g02217 850 Pfam PAN-like domain 345 410 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02217 Gma-Chr13 37102505 37107552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02217 519 850 Receptor kinase-like Gene Family AT4G11530 57.864 4.77e-133 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma13g02217 PK_Tyr_Ser-Thr 5.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02217 - - gmx:100802437 1709.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00615 15 5034607 5041025 Gma13g02217 13 37102505 37107552 GST
Gma08g00579 08 4773099 4782379 Gma13g02217 13 37102505 37107552 PCT